Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13f12
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 222 7e-58
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 221 1e-57
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 221 1e-57
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 211 2e-54
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 209 7e-54
BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein. 50 5e-06
AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase p... 50 5e-06
AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens ... 50 5e-06
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 1.1
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 1.1
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 1.1
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 1.1
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 1.1
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 4.5
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 222 bits (543), Expect = 7e-58
Identities = 109/185 (58%), Positives = 139/185 (75%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 620
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 621 AATFV 635
A TFV
Sbjct: 177 ANTFV 181
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 221 bits (541), Expect = 1e-57
Identities = 109/185 (58%), Positives = 138/185 (74%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 620
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 621 AATFV 635
A TFV
Sbjct: 177 ANTFV 181
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 221 bits (541), Expect = 1e-57
Identities = 109/185 (58%), Positives = 138/185 (74%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 620
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 621 AATFV 635
A TFV
Sbjct: 177 ANTFV 181
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 211 bits (515), Expect = 2e-54
Identities = 102/161 (63%), Positives = 123/161 (76%)
Frame = +3
Query: 153 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGH 332
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 333 KGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAII 512
GPE+L +K DVVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I
Sbjct: 60 LGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVI 119
Query: 513 TNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFV 635
NPVNST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV
Sbjct: 120 ANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFV 160
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 209 bits (510), Expect = 7e-54
Identities = 99/147 (67%), Positives = 120/147 (81%)
Frame = +3
Query: 195 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 374
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K D
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCD 72
Query: 375 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEV 554
VVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I NPVNST+PI +EV
Sbjct: 73 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEV 132
Query: 555 LKKAGVYDPNRVLGVTTLDVVRAATFV 635
KK GVY+PN++ GVTTLD+VRA TFV
Sbjct: 133 FKKHGVYNPNKIFGVTTLDIVRANTFV 159
>BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein.
Length = 234
Score = 50.4 bits (115), Expect = 5e-06
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +3
Query: 132 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 308
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 309 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 488
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 489 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFV 635
P + I+TNPV+ I + V K + NRV+G LD R F+
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFI 174
>AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase
protein.
Length = 332
Score = 50.4 bits (115), Expect = 5e-06
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +3
Query: 132 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 308
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 309 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 488
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 489 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFV 635
P + I+TNPV+ I + V K + NRV+G LD R F+
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFI 174
>AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ43406 fis, clone OCBBF2019823, highly similar
to Homo sapiens lactate dehydrogenase A -like (LDHL). ).
Length = 332
Score = 50.4 bits (115), Expect = 5e-06
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +3
Query: 132 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 308
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 309 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 488
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 489 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFV 635
P + I+TNPV+ I + V K + NRV+G LD R F+
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFI 174
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 200 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 331
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,692,558
Number of Sequences: 237096
Number of extensions: 2509501
Number of successful extensions: 6404
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6390
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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