Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13f10
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2019|AAN13657.1|  593|Drosophila melanogaster CG31392-P...    30   2.4  
AY071260-1|AAL48882.1|  236|Drosophila melanogaster RE29825p pro...    28   9.9  
AE014298-2945|AAF49028.2| 2067|Drosophila melanogaster CG11943-P...    28   9.9  
AE014298-2944|AAN09521.1| 2090|Drosophila melanogaster CG11943-P...    28   9.9  
AE014296-2985|AAF49286.1|  236|Drosophila melanogaster CG5492-PB...    28   9.9  
AE014296-2984|AAN11686.1|  236|Drosophila melanogaster CG5492-PA...    28   9.9  

>AE014297-2019|AAN13657.1|  593|Drosophila melanogaster CG31392-PA
           protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 132 KQNLNIYVRSEDFDNFRHYWHLCYKLQLSHNTILVNL 22
           K NLN ++R  D +N RH   +C K  L   T+ +++
Sbjct: 160 KANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHM 196


>AY071260-1|AAL48882.1|  236|Drosophila melanogaster RE29825p
           protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 553 LGF*LRTFCCHHSVKFHLFICNF 621
           +GF  R  CC   VK+ LFI NF
Sbjct: 1   MGFSSRMDCCGQFVKYSLFIANF 23


>AE014298-2945|AAF49028.2| 2067|Drosophila melanogaster CG11943-PA,
            isoform A protein.
          Length = 2067

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 646  FIRHTIH--TENYK*INETLLNDDNKMYVTKIPAISTIQLK 530
            ++R+TI    EN   INE+ ++DDN M V        +QLK
Sbjct: 1970 YLRNTIDYANENRNAINESNMDDDNDMSVLNASQEEIVQLK 2010


>AE014298-2944|AAN09521.1| 2090|Drosophila melanogaster CG11943-PB,
            isoform B protein.
          Length = 2090

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 646  FIRHTIH--TENYK*INETLLNDDNKMYVTKIPAISTIQLK 530
            ++R+TI    EN   INE+ ++DDN M V        +QLK
Sbjct: 1993 YLRNTIDYANENRNAINESNMDDDNDMSVLNASQEEIVQLK 2033


>AE014296-2985|AAF49286.1|  236|Drosophila melanogaster CG5492-PB,
           isoform B protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 553 LGF*LRTFCCHHSVKFHLFICNF 621
           +GF  R  CC   VK+ LFI NF
Sbjct: 1   MGFSSRMDCCGQFVKYSLFIANF 23


>AE014296-2984|AAN11686.1|  236|Drosophila melanogaster CG5492-PA,
           isoform A protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 553 LGF*LRTFCCHHSVKFHLFICNF 621
           +GF  R  CC   VK+ LFI NF
Sbjct: 1   MGFSSRMDCCGQFVKYSLFIANF 23


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,821,172
Number of Sequences: 53049
Number of extensions: 516069
Number of successful extensions: 1142
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)