Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13e23
         (182 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0010 - 11486996-11488073,11488704-11488838,11502017-11502429     26   4.9  
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443...    26   4.9  
11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928     25   6.5  
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006           25   6.5  

>09_03_0010 - 11486996-11488073,11488704-11488838,11502017-11502429
          Length = 541

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 128 NKIDQNNKRKILTQSLFSLTTVYDKCFEVFIAFPEKIHLKQN 3
           N  D  N RKIL+ S  +L +    C      FPE   ++++
Sbjct: 313 NNHDMKNMRKILSLSYHNLPSHLRTCLLYLSIFPEDYEIERS 354


>08_01_0509 +
           4433837-4434437,4434564-4434636,4435408-4437367,
           4437721-4437990,4438168-4438605,4438772-4439043,
           4439126-4439274,4439339-4439470,4439554-4439880,
           4439963-4440357,4440551-4440861,4441304-4441394,
           4441806-4441847
          Length = 1686

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -1

Query: 128 NKIDQNNKRKILTQSLFSLTTVYDKCFEVFIAFPE 24
           N  D  N  KIL+ S F L      CF     FPE
Sbjct: 352 NNPDAGNMTKILSLSYFELPHHLRTCFLYLCIFPE 386


>11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928
          Length = 839

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 155 LFHSIHLS-PNKIDQNNKRKILTQSLFSLTTVYDKCFEVFIAFPEKIHL 12
           ++HSI     + +  NN RKIL+ S ++L      C      +PE  ++
Sbjct: 315 VYHSIGSGLEDNLHVNNMRKILSVSYYNLPPHLRACLLYLSCYPEDTNI 363


>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
          Length = 585

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 182 FFFYVIK*YLFHSIHLSPNKI 120
           FF  V+  Y  H++HL+PN +
Sbjct: 67  FFHEVLDFYEIHALHLAPNAV 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,571,117
Number of Sequences: 37544
Number of extensions: 43868
Number of successful extensions: 130
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 14,793,348
effective HSP length: 40
effective length of database: 13,291,588
effective search space used: 265831760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)