Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13e20
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 65 7e-12
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 63 3e-11
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 58 1e-09
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 57 2e-09
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 56 3e-09
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 54 1e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 52 6e-08
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 52 7e-08
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 52 1e-07
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 49 5e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 49 5e-07
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 48 1e-06
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 48 1e-06
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 43 5e-05
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 42 8e-05
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 41 1e-04
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 41 2e-04
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 39 6e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 38 0.001
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 37 0.002
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 34 0.016
SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 1.8
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 27 2.4
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 26 4.2
SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|c... 26 4.2
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 26 5.5
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 26 5.5
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 26 5.5
SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 7.3
SPBC18E5.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 7.3
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 25 9.7
SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH comple... 25 9.7
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 9.7
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 25 9.7
SPCC16C4.16c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.7
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 65.3 bits (152), Expect = 7e-12
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGNIQLKK 373
+YD+LG++ AT DIK AY KL+ +HPDK+ D + + +KF+ I+EAY+VLG+ +L+
Sbjct: 9 YYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRS 68
Query: 374 MYDR 385
YD+
Sbjct: 69 QYDQ 72
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 63.3 bits (147), Expect = 3e-11
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYD 382
Y LGV+ A+ ++IK+AYYKL+K +HPD + D+A+ KF I +AYEVL + + KK +D
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFD 147
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 57.6 bits (133), Expect = 1e-09
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYD 382
YD L V P+A++ ++K AY KL+ +HPDK+ + KKF+ I+ AYEVL + Q +K+YD
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPN--GEKKFKEISLAYEVLSDPQRRKLYD 65
Query: 383 R 385
+
Sbjct: 66 Q 66
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIK-KFRAITEAYEVLGNIQLKKM 376
HY +LGV+ +AT +IK AY KL+ V+HPDK+ + +F+ + EAY +L + + ++
Sbjct: 350 HYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRR 409
Query: 377 YDRGL 391
+D G+
Sbjct: 410 FDSGV 414
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 56.4 bits (130), Expect = 3e-09
Identities = 24/64 (37%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGNIQLKK 373
+YD+L ++ A + IK +Y +L+ ++HPDK+++ EA+ +KF+ + EAY+VL + +L++
Sbjct: 10 YYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLRE 69
Query: 374 MYDR 385
YD+
Sbjct: 70 KYDK 73
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/63 (38%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKS---KDEASIKKFRAITEAYEVLGNIQLKK 373
YD+L V +A+ +IK +Y +L+ +HHPDK+ + E + ++FR + EAY++L + + ++
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESRE 67
Query: 374 MYD 382
MYD
Sbjct: 68 MYD 70
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 52.4 bits (120), Expect = 6e-08
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDK---SKDEASIKKFRAITEAYEVLGNIQLKK 373
Y LG+ AT + IK +YY+LS++ HPD+ + A+ +KF+ I AYEVL + K+
Sbjct: 10 YLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKE 69
Query: 374 MYD 382
+YD
Sbjct: 70 IYD 72
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 52.0 bits (119), Expect = 7e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYD 382
Y+VL V A+Q ++K AY KL+ +HPDK+ + KF+ I+ AYE+L + + + YD
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGD--KFKEISRAYEILADEEKRATYD 65
Query: 383 R 385
R
Sbjct: 66 R 66
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 197 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEAYEVLGNIQLKK 373
S +LGV+ A++++I+ AY +L+K HPDK+ +E + +KF I +A+EVL + + +K
Sbjct: 7 SQKQILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRK 66
Query: 374 MYD 382
+YD
Sbjct: 67 IYD 69
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 49.2 bits (112), Expect = 5e-07
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKS-KDEASIKKFRAITEAYEVLGNIQLKKM 376
+Y++LG+ A +I A+ K S +HPDK+ D + +KF + AY L ++QL+K
Sbjct: 10 YYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKA 69
Query: 377 YD 382
YD
Sbjct: 70 YD 71
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 49.2 bits (112), Expect = 5e-07
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEA---SIKKFRAITEAYEVLGNIQLK 370
+Y +L +TPKA+ +IK AY K + HPD+ A + ++F+ + EAY VL + +
Sbjct: 5 YYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRR 64
Query: 371 KMYDR 385
YDR
Sbjct: 65 AQYDR 69
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 48.0 bits (109), Expect = 1e-06
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK--DEASIKKFRAITEAYEVLGNIQLKK 373
+Y +L + AT I+ Y L+ +HPD++ +E ++K+F+ + A+EVL + +
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 374 MYDRGLLVGRENTSRMEYKPEPEPTDPTLKFYKSHATRN 490
+YD+ L G +R +YKP ++P+ K ++A+ N
Sbjct: 73 IYDQ--LFGLSTRTRSQYKPN-STSNPS-KHTSAYASYN 107
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMY 379
+Y++L + T +IK +Y KL+ HPDK+ ++ + F+ +++A++VL + L+ Y
Sbjct: 114 YYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHY 173
Query: 380 DR 385
DR
Sbjct: 174 DR 175
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 42.7 bits (96), Expect = 5e-05
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Frame = +2
Query: 200 HYDVLGVTP---KATQNDIKTAYYKLSKVHHPDKSKDEASIKK---FRAITEAYEVLGNI 361
HY VLG++ KA IK A+ K HHPDK +I F+ I +AYE+L +
Sbjct: 98 HYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDP 157
Query: 362 QLKKMYD----RGLLVGRENTSRMEYKPEPEPT-DPTLKFYKSHATRNITPTMDGKVPI- 523
++ +D + E+T++ + P + +F K ++ + +
Sbjct: 158 VRRRQFDSVDENADVEPPESTTKETFFELWTPVFESEARFSKKQPVPSLGTIESTRAEVD 217
Query: 524 ------YDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKILESTKQE 649
Y+FDSW Y D K D R+++ Q+K S +Q+
Sbjct: 218 NFYNFWYNFDSWRSFEYLD---KDIPDDGESRDNKRFQEKKNRSERQK 262
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 41.9 bits (94), Expect = 8e-05
Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = +2
Query: 200 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKS--KDEASIKKFRAITEAYEVLGNIQLKK 373
+Y +LG ++ +I+ Y KL +HPD++ ++ + +F+ I +A+EVL + +L++
Sbjct: 13 YYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRE 72
Query: 374 MYD-RGLLVGRENTSRMEYKPE 436
++D R LL + ++P+
Sbjct: 73 LFDQRRLLEAGRPDGVLRFRPK 94
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 41.1 bits (92), Expect = 1e-04
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 188 FCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDE-ASIKKFRAITEAYEVLGNIQ 364
F + YDVL + P + +DI+ Y K S + HPDK++D + F + +A L N +
Sbjct: 28 FKLNAYDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDK 87
Query: 365 LKKMYDRGLLVGRENTSRMEYKPEPEPTD 451
+++ D R N E K P D
Sbjct: 88 IRESLDSAYTAAR-NQLLKEKKLSPNSED 115
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDE----ASIKKFRAITEAYEVLGNIQLK 370
Y VLGV A+ I+ AY K + HHPD+ DE + +F + AY VL + + +
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 371 KMYDR 385
K YD+
Sbjct: 93 KHYDK 97
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 39.1 bits (87), Expect = 6e-04
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASI 313
Y++L + T NDIK Y +L K HHPDK K+ + +
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQL 70
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 194 ASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKK 373
A+ Y++L V KA+ +I AY K S ++HPDK+ + + + +L N + +K
Sbjct: 39 ATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKEL--YTLLGLIVNILRNTETRK 96
Query: 374 MYD 382
YD
Sbjct: 97 RYD 99
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD-EASIKKFRAITEAYEVLGNIQLKKMY 379
Y++L V + +IK Y KL+ +HPD++ E + F I AY +L N +K +
Sbjct: 11 YEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWH 70
Query: 380 DRGLL 394
++ L
Sbjct: 71 EKDYL 75
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 34.3 bits (75), Expect = 0.016
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD------EASIKKFRAITEAYEVLGNIQ 364
Y++LG+ + +D++ Y +LS HPDK ++ E K + IT AY L + +
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 365 LKKMY 379
++ Y
Sbjct: 160 TRENY 164
>SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 86 LNTSIQKHQTRQMLRQRNNILVTTFYRQFTTSPQFCASHYDVLGVTPKATQND 244
L+ + K T Q L N+LVT+ FT +H + V+ A+QN+
Sbjct: 272 LSNEVIKDTTFQQLANFPNVLVTSHQAFFTAEALSAIAHTTLKNVSDFASQNN 324
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +2
Query: 203 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKS-------KDEASIKKFRAITEAYEVLGNI 361
Y+ LGV +A +D+ Y + HP++S K ++ R IT Y GN+
Sbjct: 543 YNTLGVQDRALSDDVLINVYGFAVEDHPEQSDTLRAALKCIGEVRNSRLITH-YLEHGNL 601
Query: 362 QL-KKMYDRGLLVGRENTSRMEY 427
+ ++ +G ENT + Y
Sbjct: 602 DIPPEVSSLDTPIGLENTGNLCY 624
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 446 TDPTLKFY---KSHATRNITPTMDGKVPIYDFDSWSKHHYSDVFAKQKYDKEMVRNSQEK 616
TD FY K+HA+ N K+ ++ F+SW+ S K KY+ ++
Sbjct: 110 TDKCKSFYEKEKNHASHNAQ-----KLDVWIFNSWTNSELSRWLIKNKYEVPEPGTREQL 164
Query: 617 QQKILESTKQEGI 655
+ + +++ + I
Sbjct: 165 LETVFQASMGDAI 177
>SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 433
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 423 SIREVFSLPTKRPLSYIFLS*IFPSTSYASVIARNFLIDASSLDLS 286
+IRE FSL T P + IF VIA+ + S+L+L+
Sbjct: 326 AIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLN 371
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 248 KTAYYKLSKVHHPDKSKDEASIKKFR-AITEAYEVLGNIQLKKMYDRGLLVGRENTSRME 424
KT + KVH K +++ + KKF + EA +V+ + + + L + +R E
Sbjct: 34 KTLKRRYKKVHEAKKQEEKLATKKFDITVEEALQVVASTPVPSSAEEKELFFMQQVARGE 93
Query: 425 YKPEPEP 445
+ +P
Sbjct: 94 QLFQQQP 100
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 507 TGKFQFMTLIVGPNTIIQMYLQSRNMIRKWYETHKKNN 620
TG F F LI GP + +M +S + +RK +E +KN+
Sbjct: 282 TGAFFF--LINGPEIMSKMAGESESNLRKAFEEAEKNS 317
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 143 ILVTTFYRQFTTSPQFCASHYDVLGVTPKAT 235
IL ++F RQF +S FC + +LG P+A+
Sbjct: 860 ILSSSFARQFKSSNLFC-DNMKMLGYIPRAS 889
>SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 146 LVTTFYRQFTTSPQFCASHYDVLGVTPKATQNDIKT 253
L+ ++Y +TTS Q ++ LGV+ K KT
Sbjct: 239 LICSYYGIYTTSTQILSNKIMTLGVSKKRKHLSFKT 274
>SPBC18E5.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 127
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 370 FKLNIPKYLICFCYCSKLFDRCFILRFVRVVYFGKFIVS 254
F + +YLI FCYC+ FI F RV++ F+ S
Sbjct: 45 FVRGVKRYLIYFCYCAN-----FIALF-RVIFGTIFVYS 77
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 25.0 bits (52), Expect = 9.7
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 TLKFYKSHAT-RNITPTMDGKVPIYDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKI 628
T K+Y + K P+ F S S+H ++VF + D E V K + I
Sbjct: 511 TSKYYSGRKNFKKFQKKASQKAPLQAFLSLSEHKKTEVFDQDDTDLEPVPRLMSKVESI 569
>SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH complex
subunit Tfb2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 447
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 418 YGI--QTRTRTYRSYPKVLQVPCNSQYHTHHGRESSN 522
YG+ Q + + R YP L + Y + HG++S N
Sbjct: 250 YGLVYQRKITSKRFYPTRLATGLTTDYRSLHGKQSEN 286
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 521 IYDFDSWSKHHYSDVFAKQ-KYDKEMVRNS 607
I DFD WSK S++F +Q Y ++ N+
Sbjct: 827 ILDFDLWSKAPNSNLFVQQLGYIVSLIENN 856
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 530 FDSWSKHHYSDVFAKQKYDKEMVRNSQE 613
F+SW + +F++ K D + V SQE
Sbjct: 471 FESWFRDSSDHIFSRVKDDDKFVYQSQE 498
>SPCC16C4.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 161
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 404 ENTSRMEYKPEPEPTDPTLKF 466
E + +EY+ +P PT PT +F
Sbjct: 98 EFSEELEYQTKPHPTVPTCQF 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,878,811
Number of Sequences: 5004
Number of extensions: 63758
Number of successful extensions: 220
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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