Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13e18
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 32 0.17
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 32 0.17
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 32 0.17
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 0.67
AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical ... 29 1.2
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 28 2.0
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 28 2.7
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 28 2.7
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 28 2.7
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 27 3.6
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 3.6
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 27 3.6
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 27 3.6
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 27 4.7
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 27 4.7
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 26 8.2
U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical pr... 26 8.2
AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans GDP-4-keto-6-... 26 8.2
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 26 8.2
AF098992-12|AAC67453.2| 328|Caenorhabditis elegans Hypothetical... 26 8.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 26 8.2
AF039037-4|AAC48229.3| 311|Caenorhabditis elegans Protein kinas... 26 8.2
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 26 8.2
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 160 CGDCDLCVNPCCLALSACCLIPCLCPNACG 249
C C C CC C PC C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 126
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Frame = +1
Query: 145 CFSFDCGDCDLCVNP-CCLALSACCLI--PCLCPNAC 246
C CG C C P CC CC C C C
Sbjct: 79 CCGCGCGCC--CCRPRCCCCCRRCCTCCRTCCCTRCC 113
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 160 CGDCDLCVNPCCLALSACCLIPCLCPNACG 249
C C C CC C PC C CG
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 124
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 160 CGDCDLCVNPCCLALSACCLIPCLCPNACG 249
C C C CC C PC C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 125
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 160 CGDCDLCVNPCCLALSACCLIPCLCPNACG 249
C C C CC C PC C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 125
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 160 CGDCDLCVNPCCLALSACCLIPCLCPNACG 249
C C C CC C PC C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 126
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.9 bits (64), Expect = 0.67
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 169 CDLCVNPCCLALSACCLIPCLCPNACG 249
C C CC C PC C CG
Sbjct: 82 CCTCCRTCCCTRCCTCCRPCCCGCGCG 108
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.9 bits (64), Expect = 0.67
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 169 CDLCVNPCCLALSACCLIPCLCPNACG 249
C C CC C PC C CG
Sbjct: 84 CCTCCRTCCCTRCCTCCRPCCCGCGCG 110
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.9 bits (64), Expect = 0.67
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 169 CDLCVNPCCLALSACCLIPCLCPNACG 249
C C CC C PC C CG
Sbjct: 87 CCTCCRTCCCTRCCTCCRPCCCGCGCG 113
>AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical
protein F18A12.5 protein.
Length = 700
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 233 HRHGIRQQALNAKQQGFTHRSQSPQSNEKQRPILLLFG 120
HR +++A+N +GF R +S ++E + I L+FG
Sbjct: 107 HRDCKKRKAVNKLVRGFLQRDESTFTSESESAIKLIFG 144
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 175 LCVNPCCLALSACCLIPCLCPN---ACG 249
+C+ CC L+ C + C+C N ACG
Sbjct: 196 MCLAVCCCPLTCCLPLICICCNYVDACG 223
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 175 LCVNPCCLALSACCLIPCLCPNACG 249
L V+ C + C LI C+C N CG
Sbjct: 902 LLVDLGCFITNKCGLISCICLNLCG 926
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 175 LCVNPCCLALSACCLIPCLCPNACG 249
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 175 LCVNPCCLALSACCLIPCLCPNACG 249
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 175 LCVNPCCLALSACCLIPCLCPNACG 249
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 332 PDIPTL-HHQTEAIPVTLHT 388
P PT H+Q +A+PVT+HT
Sbjct: 53 PTTPTFNHYQHQALPVTMHT 72
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 44 VILIVKVETGAMFCYLF*NISLQL*NRITGGWVSVFHSTVG 166
V+ I T + CYLF I + + T W+S+++ T G
Sbjct: 101 VLFICVTATSDLICYLFIPIRMLIFLATTYVWISLYYHTQG 141
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 332 PDIPTL-HHQTEAIPVTLHT 388
P PT H+Q +A+PVT+HT
Sbjct: 53 PTTPTFNHYQHQALPVTMHT 72
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 332 PDIPTL-HHQTEAIPVTLHT 388
P PT H+Q +A+PVT+HT
Sbjct: 27 PTTPTFNHYQHQALPVTMHT 46
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical protein
T25G3.2 protein.
Length = 1322
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 241 RSDTDTESDNKRSMLNSRGLHTGHNPHSRMKNRDPSS 131
++D + +N R M+NS G+ TGH ++R S
Sbjct: 1259 KNDDERIMNNARLMINSLGVSTGHAADGYTRHRGEES 1295
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase 1
protein.
Length = 1322
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 241 RSDTDTESDNKRSMLNSRGLHTGHNPHSRMKNRDPSS 131
++D + +N R M+NS G+ TGH ++R S
Sbjct: 1259 KNDDERIMNNARLMINSLGVSTGHAADGYTRHRGEES 1295
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 157 DCGDCDLCVNPCCLALSACCLIP 225
DCG + C +PCC L+ C L P
Sbjct: 452 DCGSRENCQDPCCDPLT-CTLRP 473
>U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical
protein R01H2.5 protein.
Length = 315
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 76 HVLLFILKYFITVIKPNNRRMGLCFSFDCGDCDLCVNPC 192
H L L++F + N+ + LC FD C C++ C
Sbjct: 72 HNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLSTC 110
>AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
protein.
Length = 315
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 76 HVLLFILKYFITVIKPNNRRMGLCFSFDCGDCDLCVNPC 192
H L L++F + N+ + LC FD C C++ C
Sbjct: 72 HNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLSTC 110
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 157 DCGDCDLCVNPCCLALSACCLIP 225
DCG + C +PCC L+ C L P
Sbjct: 452 DCGSRENCQDPCCDPLT-CTLRP 473
>AF098992-12|AAC67453.2| 328|Caenorhabditis elegans Hypothetical
protein F53C3.1 protein.
Length = 328
Score = 26.2 bits (55), Expect = 8.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = -1
Query: 239 FGHRHGIRQQALNAKQ----QGFTHRSQSPQS----NEKQRPILLLFGFITVMKYFKINN 84
FG G+ Q L A + QGF HR PQ+ + +R ++ + F KY +N+
Sbjct: 122 FGTGMGVGSQCLEAVEELHKQGFIHRDLKPQNYASGQDDERHLIYILDFGIARKY--LND 179
Query: 83 K 81
K
Sbjct: 180 K 180
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 169 CDLCVNPCCLALSACCLIPC 228
C PCC A CC PC
Sbjct: 82 CQPAFGPCCPATPNCCPKPC 101
>AF039037-4|AAC48229.3| 311|Caenorhabditis elegans Protein kinase
protein 34 protein.
Length = 311
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 2 TINERLESHSSLRIVILIVKVETGAMFCYLF 94
TI E L H + VI ++ E+ A FCY+F
Sbjct: 75 TIQESLTGHEN---VIQVLGKESDAQFCYMF 102
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 178 CVNPCCLALSACCLIPC 228
C NP CL + C L PC
Sbjct: 369 CANPPCLPVPRCLLNPC 385
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,826,437
Number of Sequences: 27780
Number of extensions: 151137
Number of successful extensions: 501
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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