Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13e18
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   3.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   8.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   8.7  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 FDCGDCDLCVNPCCLAL 204
           F  G C+  +NPC  AL
Sbjct: 48  FWLGYCNSAINPCIYAL 64


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 FDCGDCDLCVNPCCLAL 204
           F  G C+  +NPC  AL
Sbjct: 496 FWLGYCNSAINPCIYAL 512


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -1

Query: 248  PQAFGHRHGIRQQALNAKQQGFTHRSQSPQSNEKQRP 138
            P  F        Q  NA QQG       PQS E  +P
Sbjct: 989  PSPFKRGRYTPPQPANA-QQGQAQAQAKPQSQEANKP 1024


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = -2

Query: 247 HRRSDTDTESDNKRSMLNSRGLHTGHNPHSRMKNRD 140
           H ++   ++SDN+ +  ++   H     ++R  N D
Sbjct: 429 HNQARHSSKSDNQNNNQHNDQAHHSSKSNNRHNNND 464


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 357 WWWRVGIS 334
           WWW + IS
Sbjct: 366 WWWNMKIS 373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,604
Number of Sequences: 438
Number of extensions: 1568
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)