Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13e17
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   1.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   1.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.8  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 400 WCGPC*YASGG*ERLRHRHQDSC 332
           WCG    +SG  E  R +H D+C
Sbjct: 36  WCGHGNKSSGPNELGRFKHTDAC 58


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 400 WCGPC*YASGG*ERLRHRHQDSC 332
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 400 WCGPC*YASGG*ERLRHRHQDSC 332
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 487 NVWQPFLNLLNRQD 528
           N W+P  NL+N  D
Sbjct: 273 NTWEPISNLINCSD 286


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = +1

Query: 175 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNL 303
           D   + ++ Q++ ++I +TR       + +++ + D DF+V L
Sbjct: 389 DSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKL 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,101
Number of Sequences: 438
Number of extensions: 2989
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)