Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13e16
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065033-1|AAH65033.1|  146|Homo sapiens FLJ20489 protein protein.     49   2e-05
BC002759-1|AAH02759.2|   89|Homo sapiens FLJ20489 protein protein.     32   1.8  

>BC065033-1|AAH65033.1|  146|Homo sapiens FLJ20489 protein protein.
          Length = 146

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
 Frame = +1

Query: 172 LRTKIHIALSSIGLVLGVSAFICFCIVYANIEAGMWALLSGINAGLALMLHCHYLKESLH 351
           L+  +  A S I  V G S F+ + +VY          L+G+ A   L+ H  Y+++   
Sbjct: 6   LQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWR 65

Query: 352 VNFSRKSLQYIGDIGII-GFVAGGALMIFYIFLETYYQADVTPIETSIIIRLVWSFMMTK 528
                K L+    +G++   V+  A   F +   T +Q+   P  TS  +  VWSF+  K
Sbjct: 66  TWL--KGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDP--TSYYLSSVWSFISFK 121

Query: 529 WGIMLYWTTKKYLKTYNDHQLFSE 600
           W  +L     +Y   + D  + S+
Sbjct: 122 WAFLLSLYAHRYRADFADISILSD 145


>BC002759-1|AAH02759.2|   89|Homo sapiens FLJ20489 protein protein.
          Length = 89

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 367 KSLQYIGDIGII-GFVAGGALMIFYIFLETYYQADVTPIETSIIIRLVWSFMMTKWGIML 543
           K L+    +G++   V+  A   F +   T +Q+   P  TS  +  VWSF+  KW  +L
Sbjct: 12  KGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDP--TSYYLSSVWSFISFKWAFLL 69

Query: 544 YWTTKKYLKTYNDHQLFSE 600
                +Y   + D  + S+
Sbjct: 70  SLYAHRYRADFADISILSD 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,179,774
Number of Sequences: 237096
Number of extensions: 2092098
Number of successful extensions: 7593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)