Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13e03
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089521-1|AAL90259.1|  385|Drosophila melanogaster GM13388p pro...   111   5e-25
AE014134-2235|AAF53217.1|  385|Drosophila melanogaster CG12292-P...   111   5e-25

>AY089521-1|AAL90259.1|  385|Drosophila melanogaster GM13388p
           protein.
          Length = 385

 Score =  111 bits (268), Expect = 5e-25
 Identities = 53/133 (39%), Positives = 69/133 (51%)
 Frame = +1

Query: 127 TLYEHYNDNSFYIGLGLAXXXXXXXXXXXXXXXXXXXXXXXSGNVRAAAGGFAYLKQWMW 306
           ++ E  ++  FYIG+GLA                        G VRA+AGGF YL++W+W
Sbjct: 35  SMAETVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIW 94

Query: 307 WLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKFLNEKLNFMGKIACFXC 486
           W GL+TM +GE              VTPLG            +FLNEKLN +GKI CF C
Sbjct: 95  WAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLC 154

Query: 487 IIGSIVFVIHSPE 525
           I+GS + VIHSP+
Sbjct: 155 ILGSTIIVIHSPK 167


>AE014134-2235|AAF53217.1|  385|Drosophila melanogaster CG12292-PA
           protein.
          Length = 385

 Score =  111 bits (268), Expect = 5e-25
 Identities = 53/133 (39%), Positives = 69/133 (51%)
 Frame = +1

Query: 127 TLYEHYNDNSFYIGLGLAXXXXXXXXXXXXXXXXXXXXXXXSGNVRAAAGGFAYLKQWMW 306
           ++ E  ++  FYIG+GLA                        G VRA+AGGF YL++W+W
Sbjct: 35  SMAETVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIW 94

Query: 307 WLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKFLNEKLNFMGKIACFXC 486
           W GL+TM +GE              VTPLG            +FLNEKLN +GKI CF C
Sbjct: 95  WAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLC 154

Query: 487 IIGSIVFVIHSPE 525
           I+GS + VIHSP+
Sbjct: 155 ILGSTIIVIHSPK 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,871,395
Number of Sequences: 53049
Number of extensions: 338573
Number of successful extensions: 620
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)