Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13d21
(1062 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 349 4e-97
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 4e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 4e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 7e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 7e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 3e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 5e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 42 2e-04
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 3.4
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 4.5
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 4.5
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 27 4.5
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 27 5.9
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 27 5.9
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 5.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 7.8
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 7.8
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 349 bits (858), Expect = 4e-97
Identities = 171/187 (91%), Positives = 181/187 (96%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIEKCES 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+ +S
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 633 KDSGQRG 653
K + G
Sbjct: 181 KIQDKEG 187
Score = 349 bits (858), Expect = 4e-97
Identities = 171/187 (91%), Positives = 181/187 (96%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIEKCES 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+ +S
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256
Query: 633 KDSGQRG 653
K + G
Sbjct: 257 KIQDKEG 263
Score = 349 bits (858), Expect = 4e-97
Identities = 171/187 (91%), Positives = 181/187 (96%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIEKCES 632
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+ +S
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 332
Query: 633 KDSGQRG 653
K + G
Sbjct: 333 KIQDKEG 339
Score = 301 bits (740), Expect = 8e-83
Identities = 146/153 (95%), Positives = 153/153 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 273 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 452
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 453 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 551
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 91.5 bits (217), Expect = 2e-19
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGGXQIFVK 798
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG QIFVK
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR-GGMQIFVK 82
Score = 91.5 bits (217), Expect = 2e-19
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGGXQIFVK 798
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG QIFVK
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR-GGMQIFVK 158
Score = 91.5 bits (217), Expect = 2e-19
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGGXQIFVK 798
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG QIFVK
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR-GGMQIFVK 234
Score = 91.5 bits (217), Expect = 2e-19
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGGXQIFVK 798
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG QIFVK
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR-GGMQIFVK 310
Score = 83.8 bits (198), Expect = 4e-17
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNL 756
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG-MQIFVKTLTGK 353
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG-MQIFVKTLTGK 581
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 83.8 bits (198), Expect = 4e-17
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNL 756
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIEKCESKDSGQRG 653
MQIFVKTLTGKTITLEVE+SDTI+ +SK + G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG-MQIFVKTLTGK 353
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG-MQIFVKTLTGK 581
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 83.8 bits (198), Expect = 4e-17
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNL 756
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIEKCESKDSGQRG 653
MQIFVKTLTGKTITLEVE+SDTI+ +SK + G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG 320
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG 548
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 85.4 bits (202), Expect = 1e-17
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGG 780
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGG 77
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIEKCESKDSGQRG 653
MQIFVKTLTGKTITLEVE+SDTI+ +SK + G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IQKESTLHLVLRLRGG 320
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 501 IQKESTLHLVLRLRGG 548
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 85.4 bits (202), Expect = 1e-17
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +1
Query: 622 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNLXFXTGVGG 780
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK +L GG
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGG 77
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIEKCESKDSGQRG 653
MQIFVKTLTGKTITLEVE+SDTI+ +SK + G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 272
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 273 IQKESTLHLVLRLRGG 320
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 501 IQKESTLHLVLRLRGG 548
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 50.8 bits (116), Expect = 3e-07
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +1
Query: 625 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKNLLCNL 756
+K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ + +L
Sbjct: 26 IKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHL 69
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 549 MQIFVKTLTGKTITLEVEASDTIEKCESKDSGQRG 653
M I VKTLTGK I L+++ +D + + + + + G
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEG 35
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +3
Query: 87 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 266
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 267 YNIQKESTLHLVLRL 311
Y IQ ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 321 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 500
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 501 IQKESTLHLVLRL 539
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 31.1 bits (67), Expect = 0.27
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 625 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 735
+K I I ++QRLI+AG+ L+D +L Y IQ
Sbjct: 29 LKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQ 65
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 123 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 284
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 351 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 512
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/43 (34%), Positives = 30/43 (69%)
Frame = +1
Query: 610 TPLRNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 738
T + +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI++
Sbjct: 22 TKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKE 64
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/99 (27%), Positives = 51/99 (51%)
Frame = +3
Query: 348 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 527
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL L
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL-L 68
Query: 528 VLRLRGGMQIFVKTLTGKTITLEVEASDTIEKCESKDSG 644
++ G + + + A +++E+ ES+D G
Sbjct: 69 MMGTAGEL----------PTAMPIPAVESVEQEESEDDG 97
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 120 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 293
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 606 SDTIEKCESKDSGQRGNSSGSAA 674
+DT+E+ E+ + GQR NS G+A+
Sbjct: 662 NDTLERVETGNQGQRMNSIGNAS 684
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 736 SGCCSRIVYGHLQAVCPQRSTAADPEE--FPLCPESLLSHFSM 614
+G C+ I+Y H V +R+ PE+ +PL S++ SM
Sbjct: 381 AGACTPIIYVHYNRVYTRRNGVMSPEDRLYPLFFGSIMLPISM 423
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 96 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 269
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 270 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 359
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 324 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 497
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 498 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 587
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 661 EEFPLCPESLLSHFSMVSD 605
EEF LC ESLL+H + + D
Sbjct: 345 EEFKLCKESLLAHKNSIYD 363
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 51 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 191
+N N F ETT + L + + +++E + EN+K+ ++ K
Sbjct: 222 NNLNQIVRFIFETTADMIGIDLAKRQVPIQLERTSASENLKSNLKIK 268
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 897 IPXFXRNLGLSPFSRGSGXFNFXVGRVL 814
IP F N+ ++ F RG F F RVL
Sbjct: 1211 IPGFNLNMFITRFDRGHSDFQFDTERVL 1238
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 617 NGVRCFNF*CDGFTGKCFHKDLHATS 540
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 7.8
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -3
Query: 436 SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTK-----ICIPPLRRNTKWRVDSF*I 272
S IPS + + ++ S A++S VSV T + +PP +T SF
Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTS----SFST 201
Query: 271 L*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSNVMVLPVRVFTKICM 92
+ + ++ PSSS F + G P + S++S AS S+ VLP + T
Sbjct: 202 ITNTSMIPSSSSFTT------TTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
Query: 91 VVSFWNS 71
V+ +S
Sbjct: 256 PVTVSSS 262
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 26.2 bits (55), Expect = 7.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 633 CFHISQWCQMLQLLV*W 583
CFH S WC M + W
Sbjct: 170 CFHTSVWCDMSSYCIAW 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,867,768
Number of Sequences: 5004
Number of extensions: 75737
Number of successful extensions: 257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 559212080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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