Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13d12
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001709-1|AAN71464.1|  544|Drosophila melanogaster RE67001p pro...    31   1.4  
AE014134-970|AAF52288.2|  544|Drosophila melanogaster CG9171-PB,...    31   1.4  
AE014134-969|AAN10556.1|  544|Drosophila melanogaster CG9171-PA,...    31   1.4  
U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.         30   3.3  
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro...    30   3.3  
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P...    30   3.3  
BT023835-1|AAZ86756.1|  509|Drosophila melanogaster LD21074p pro...    29   5.7  
AE014298-1954|AAF48312.2|  509|Drosophila melanogaster CG10990-P...    29   5.7  

>BT001709-1|AAN71464.1|  544|Drosophila melanogaster RE67001p
           protein.
          Length = 544

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 437 RRNFIFRVSIVINIAVMLYAAMHL 508
           RRN++ R SI+IN+AV+LY    L
Sbjct: 13  RRNWLLRCSILINVAVILYIGSQL 36


>AE014134-970|AAF52288.2|  544|Drosophila melanogaster CG9171-PB,
           isoform B protein.
          Length = 544

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 437 RRNFIFRVSIVINIAVMLYAAMHL 508
           RRN++ R SI+IN+AV+LY    L
Sbjct: 13  RRNWLLRCSILINVAVILYIGSQL 36


>AE014134-969|AAN10556.1|  544|Drosophila melanogaster CG9171-PA,
           isoform A protein.
          Length = 544

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 437 RRNFIFRVSIVINIAVMLYAAMHL 508
           RRN++ R SI+IN+AV+LY    L
Sbjct: 13  RRNWLLRCSILINVAVILYIGSQL 36


>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
          Length = 1221

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +1

Query: 301 QNKL*CSH----EQNPIGNCVLEDVGGRYSETLLFSSIKVPNHC 420
           Q+KL CSH    EQ PI     ED   +Y+ +    S   PNHC
Sbjct: 27  QDKLTCSHLNIEEQQPIAIAGSEDEPSQYNHSSKEISQSNPNHC 70


>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p
           protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +1

Query: 301 QNKL*CSH----EQNPIGNCVLEDVGGRYSETLLFSSIKVPNHC 420
           Q+KL CSH    EQ PI     ED   +Y+ +    S   PNHC
Sbjct: 50  QDKLTCSHLNIEEQQPIAIAGSEDEPSQYNHSSKEISQSNPNHC 93


>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
           protein.
          Length = 1165

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +1

Query: 301 QNKL*CSH----EQNPIGNCVLEDVGGRYSETLLFSSIKVPNHC 420
           Q+KL CSH    EQ PI     ED   +Y+ +    S   PNHC
Sbjct: 27  QDKLTCSHLNIEEQQPIAIAGSEDEPSQYNHSSKEISQSNPNHC 70


>BT023835-1|AAZ86756.1|  509|Drosophila melanogaster LD21074p
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 560 SERNAELQYLKREITRNDTDRLIEPMIRDFEE 655
           ++RN EL+ +  EITR +  +L EP++ ++ E
Sbjct: 179 NDRNVELREVITEITREEFFKLAEPIVLEYYE 210


>AE014298-1954|AAF48312.2|  509|Drosophila melanogaster CG10990-PA
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 560 SERNAELQYLKREITRNDTDRLIEPMIRDFEE 655
           ++RN EL+ +  EITR +  +L EP++ ++ E
Sbjct: 179 NDRNVELREVITEITREEFFKLAEPIVLEYYE 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,784,048
Number of Sequences: 53049
Number of extensions: 700074
Number of successful extensions: 1590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)