Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13d08
         (408 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0410 - 17347853-17347978,17348289-17348399,17348481-173488...    27   4.3  
10_02_0015 + 4243218-4243420,4243553-4243745,4243818-4243898,424...    27   4.3  
08_02_1108 - 24360289-24360414,24360725-24360822,24361129-243612...    27   4.3  
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756...    27   5.7  
03_01_0437 + 3390099-3392570                                           27   5.7  
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    27   7.6  

>11_04_0410 -
           17347853-17347978,17348289-17348399,17348481-17348840,
           17348913-17349105,17349239-17349279
          Length = 276

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 111 DYSYCFICKKTDKLRRTQIVKRCLKKQ 31
           ++ YCF C  TDK+   +++++  KK+
Sbjct: 76  EFWYCFKCDPTDKVEADKVLEQNFKKK 102


>10_02_0015 +
           4243218-4243420,4243553-4243745,4243818-4243898,
           4244267-4244377,4244921-4245211,4245301-4245363,
           4245571-4245636,4245761-4245979
          Length = 408

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 111 DYSYCFICKKTDKLRRTQIVKRCLKKQ 31
           ++ YCF C  TDK+   +++++  KK+
Sbjct: 130 EFWYCFKCDPTDKVEADKVLEQNFKKK 156


>08_02_1108 -
           24360289-24360414,24360725-24360822,24361129-24361291,
           24361364-24361556,24361690-24361730
          Length = 206

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 111 DYSYCFICKKTDKLRRTQIVKRCLKKQ 31
           ++ YCF C  TDK+   +++++  KK+
Sbjct: 76  EFWYCFKCDPTDKVEADKVLEQNFKKK 102


>04_04_1509 -
           34074206-34074398,34074506-34074777,34075411-34075608,
           34076092-34076187,34076318-34076500,34076597-34076799,
           34076887-34077013,34077098-34077292,34077400-34077540,
           34077669-34077812,34077876-34078040,34078776-34078976,
           34079049-34079195,34079275-34079427,34079731-34079833,
           34079954-34080069,34080168-34080349,34080442-34080541,
           34081200-34081527,34081605-34081834,34081979-34082110,
           34082787-34082859,34083274-34083338
          Length = 1248

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 82  DR*IETNTNS*KMFEETKYLAQ 17
           DR  + NT   ++FE+TKYL Q
Sbjct: 918 DRVFDANTTQEEVFEDTKYLVQ 939


>03_01_0437 + 3390099-3392570
          Length = 823

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 28  ILFLQTSFNYLCSSQFICLLTYKTIRIINIFTNFYMNQCM 147
           ++ L T   YL  +Q     TYK ++ +N  TN Y + CM
Sbjct: 605 LIKLYTKVVYLAEAQ----KTYKLLKSLNADTNLYASNCM 640


>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
            5710542-5710661,5711321-5711421,5711618-5711743,
            5713504-5713596,5713694-5713816,5713889-5714032,
            5714539-5714672,5714893-5715002,5715315-5715430,
            5716438-5716572,5716650-5716820,5717545-5717709,
            5718165-5718242,5718313-5718445,5718551-5718741,
            5718842-5718914,5719001-5719056,5719142-5719300,
            5719383-5719496,5719562-5719654,5720544-5720726,
            5720801-5720878,5720966-5721052,5721135-5721216,
            5721288-5721400,5721486-5721636,5721759-5721877,
            5721966-5722163,5722377-5722442,5723837-5723957,
            5724224-5724343,5724412-5724542,5725210-5725341,
            5725418-5725519,5726231-5726437,5726510-5726626,
            5727468-5727623,5727721-5727810,5728624-5728848,
            5728969-5729091,5729202-5729284,5729459-5729618,
            5730264-5730374,5730652-5730751,5731375-5731454,
            5731752-5731847,5731961-5732110
          Length = 1991

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 108  NQYLHEFLYESVYELRL*MLPCG 176
            N  LHEF ++ +YEL L  L CG
Sbjct: 1002 NALLHEFGFQLLYELCLDPLTCG 1024


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,681,836
Number of Sequences: 37544
Number of extensions: 97669
Number of successful extensions: 282
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)