Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13d03
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M16534-1|AAA28429.1|  336|Drosophila melanogaster protein ( D.me...    31   1.9  
AY069553-1|AAL39698.1|  336|Drosophila melanogaster LD27706p pro...    31   1.9  
AE014296-3762|ABI31271.1|  336|Drosophila melanogaster CG17520-P...    31   1.9  
AE014296-3761|AAN11416.1|  336|Drosophila melanogaster CG17520-P...    31   1.9  
AE014296-3760|AAF45439.1|  336|Drosophila melanogaster CG17520-P...    31   1.9  
AE014296-3759|AAN11415.1|  336|Drosophila melanogaster CG17520-P...    31   1.9  

>M16534-1|AAA28429.1|  336|Drosophila melanogaster protein (
           D.melanogaster caseinkinase II alpha subunit mRNA,
           complete cds. ).
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


>AY069553-1|AAL39698.1|  336|Drosophila melanogaster LD27706p
           protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


>AE014296-3762|ABI31271.1|  336|Drosophila melanogaster CG17520-PD,
           isoform D protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


>AE014296-3761|AAN11416.1|  336|Drosophila melanogaster CG17520-PC,
           isoform C protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


>AE014296-3760|AAF45439.1|  336|Drosophila melanogaster CG17520-PB,
           isoform B protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


>AE014296-3759|AAN11415.1|  336|Drosophila melanogaster CG17520-PA,
           isoform A protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 461 TWTLFIFYLSKTFGQQLYKTFKSHARRYYLFYVTSNL*YC 342
           T  L   +++ T  +QLY+T   +  RYYLF +   L YC
Sbjct: 106 TPALIFEHVNNTDFKQLYQTLTDYEIRYYLFELLKALDYC 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,675,858
Number of Sequences: 53049
Number of extensions: 495243
Number of successful extensions: 815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)