Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13c19
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   4.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    20   8.1  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 164 AEDCPSDIRARTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFS-KGYCSQSLIYEEAS 340
           A+ C  D + + G  P+QQ+   E C     + +    +   C   KG+  +S+      
Sbjct: 168 ADSC--DSKKKKGPTPRQQE---ELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVY 222

Query: 341 DCPEGNDC 364
            C  GN+C
Sbjct: 223 QCKYGNNC 230


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = +2

Query: 182 DIRARTGLCPKQQKDGIECCYGVSVKETRC----RKHGGECFSKGYCSQSLIYE-EASDC 346
           D   RT L P       E  YG+   E++C        GE  S+  CS  L Y+ EA  C
Sbjct: 79  DCGDRTQLEPPISSPHCERLYGIFADESKCDVFWNCWNGEA-SRYQCSPGLAYDREARVC 137


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = +2

Query: 182 DIRARTGLCPKQQKDGIECCYGVSVKETRC----RKHGGECFSKGYCSQSLIYE-EASDC 346
           D   RT L P       E  YG+   E++C        GE  S+  CS  L Y+ EA  C
Sbjct: 79  DCGDRTQLEPPISSPHCERLYGIFADESKCDVFWNCWNGEA-SRYQCSPGLAYDREARVC 137


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +2

Query: 269 CRKHGGECFSKGY-CSQSLIYEEAS 340
           CRK+ G C   G  CSQ   + + S
Sbjct: 97  CRKNTGRCAFDGICCSQDSCHADKS 121


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 234 SIPSFCCLGQSPVLALISD 178
           SIP+F CL  S  L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 234 SIPSFCCLGQSPVLALISD 178
           SIP+F CL  S  L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 81  ETVKMISVK*IPLNKRI 131
           E VKM+ ++ + LNK+I
Sbjct: 459 ELVKMLKIRFVILNKQI 475


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 81  ETVKMISVK*IPLNKRI 131
           E VKM+ ++ + LNK+I
Sbjct: 184 ELVKMLKIRFVILNKQI 200


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 182 DIRARTGLCPKQQKDGIE 235
           DIRA     P+QQ DG E
Sbjct: 90  DIRAAGYYGPQQQMDGQE 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,176
Number of Sequences: 336
Number of extensions: 2183
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)