Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13c16
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein. 49 1e-05
U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein. 49 2e-05
BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein. 49 2e-05
BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein. 49 2e-05
AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein. 49 2e-05
>BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 49.2 bits (112), Expect = 1e-05
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = +3
Query: 156 EEVVLVLSPDSLPWYLNII--LKKSNLPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 323
+++V+ +P S P L ++ L + + +T H HSSV S E L K K + +
Sbjct: 120 KDIVINANPGSPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179
Query: 324 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 491
+ ++ LI+K +++K S + PI G NI R+L ++ H N ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235
Query: 492 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWIYGDKFSVVDLAAYNLIKQ 638
+DI L+ S K K AV + + W+ G++ +V D+ +++++Q
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
>U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein.
Length = 312
Score = 48.8 bits (111), Expect = 2e-05
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = +3
Query: 156 EEVVLVLSPDSLPWYLNII--LKKSNLPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 323
+++V+ +P S P L ++ L + + +T H HSSV S E L K K + +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179
Query: 324 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 491
+ ++ LI+K +++K S + PI G NI R+L ++ H N ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235
Query: 492 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWIYGDKFSVVDLAAYNLIKQ 638
+DI L+ S K K AV + + W+ G++ +V D+ +++++Q
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
>BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = +3
Query: 156 EEVVLVLSPDSLPWYLNII--LKKSNLPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 323
+++V+ +P S P L ++ L + + +T H HSSV S E L K K + +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179
Query: 324 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 491
+ ++ LI+K +++K S + PI G NI R+L ++ H N ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235
Query: 492 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWIYGDKFSVVDLAAYNLIKQ 638
+DI L+ S K K AV + + W+ G++ +V D+ +++++Q
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
>BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = +3
Query: 156 EEVVLVLSPDSLPWYLNII--LKKSNLPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 323
+++V+ +P S P L ++ L + + +T H HSSV S E L K K + +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179
Query: 324 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 491
+ ++ LI+K +++K S + PI G NI R+L ++ H N ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235
Query: 492 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWIYGDKFSVVDLAAYNLIKQ 638
+DI L+ S K K AV + + W+ G++ +V D+ +++++Q
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
>AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = +3
Query: 156 EEVVLVLSPDSLPWYLNII--LKKSNLPIHTTCHVHSSVPS--EKLAKIKAFTQKLKTSE 323
+++V+ +P S P L ++ L + + +T H HSSV S E L K K + +
Sbjct: 120 KDIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQ 179
Query: 324 NPKVNLRLIFKAAADSELKLSALS-TPILGNVNILRYLSLAYPTIIPYDH---NDHIVDN 491
+ ++ LI+K +++K S + PI G NI R+L ++ H N ++D+
Sbjct: 180 DYQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLF----SLFGQKHNAVNATLIDS 235
Query: 492 LLDIC-HVLERTSEKNKEAVVNRLFAHY--KTWIYGDKFSVVDLAAYNLIKQ 638
+DI L+ S K K AV + + W+ G++ +V D+ +++++Q
Sbjct: 236 WVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,182,999
Number of Sequences: 237096
Number of extensions: 1527741
Number of successful extensions: 6786
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6786
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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