Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13c14
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 42 6e-06
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.60
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.2
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 5.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.8
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.8
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 41.5 bits (93), Expect = 6e-06
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 361 KESRCMLITYSIFMVILVAVKIYLAIVVFGFL--SDVTSTITSWVTTAFN----TSSLRD 522
+ES CM IT++ F++ ++ V+I +A+ F + D I+ FN S +D
Sbjct: 75 RESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKD 134
Query: 523 VYHVMEALFNCCGTTGPSSYDGILSQLPPSCC 618
++ CCG S Y+ +P SCC
Sbjct: 135 FIDFIQKNLQCCGVHSLSDYND--KPIPASCC 164
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 70 MCCPEFIAKYVLFIANLVFS 129
M C + KY+LFI N VF+
Sbjct: 1 MSCGMGMIKYLLFIFNFVFA 20
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.60
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 81 RVYS*ICTLHRQPCFFGSTVT 143
++Y+ C LHR C GS++T
Sbjct: 123 KIYANHCELHRAACHSGSSLT 143
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 432 GYRGIRFSVRRHQHNNQLGDHSVQHEQLKRRISRHGSSIQ 551
G +G +++ +NQ +Q +QLKR ++ SIQ
Sbjct: 1041 GLQGQTIFIKQSPSSNQ--SQQIQQQQLKRVVTNQQQSIQ 1078
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 474 CAGDVGQKTEYH 439
C+G+V TEYH
Sbjct: 500 CSGEVASLTEYH 511
Score = 22.2 bits (45), Expect = 4.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 501 QHEQLKRRISRHGSSIQLLWNNRPLFVRRYLVTAA 605
Q +Q +++ + SS L+ N P RYL AA
Sbjct: 800 QQQQQQQQQQQQSSSDYLMVGNSPASSPRYLSAAA 834
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 5.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3
Query: 297 YWQSVDW 277
YWQ VDW
Sbjct: 573 YWQGVDW 579
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 495 SVQHEQLKRRISRHGSSIQLLWNNRPL 575
+V ++ KRR+ ++G + + N PL
Sbjct: 1084 TVSQQKQKRRMVKYGKLVMIHEENAPL 1110
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 60 SKNNVLPRVYS*ICTLHRQPCFF 128
+KNN++P T R P F+
Sbjct: 399 NKNNLIPSALQSYSTSMRDPAFY 421
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 60 SKNNVLPRVYS*ICTLHRQPCFF 128
+KNN++P T R P F+
Sbjct: 399 NKNNLIPSALQSYSTSMRDPAFY 421
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 94 KYVLFIANLVFSDPQSRQFTSTDPNDEDLEPS 189
KY+ + N V + T T P ++EPS
Sbjct: 284 KYLCIVNNSVGGESVETVLTVTAPLGAEIEPS 315
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/25 (24%), Positives = 12/25 (48%)
Frame = +2
Query: 521 TYITSWKLYSIAVEQPAPLRTTVSC 595
TY+ WK + + P+ ++C
Sbjct: 260 TYLIKWKNWDLKYNTWEPISNLINC 284
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,968
Number of Sequences: 438
Number of extensions: 3673
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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