Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13c06
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 53 4e-08
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 45 8e-06
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 44 1e-05
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 44 2e-05
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 44 2e-05
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 41 1e-04
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 40 2e-04
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 35 0.012
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.44
SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT |Schizosa... 27 3.1
SPAC1751.02c |rsm19||mitochondrial ribosomal protein subunit S19... 26 4.1
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 26 4.1
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 26 4.1
SPAC5D6.04 |||auxin family transmembrane transporter |Schizosacc... 25 7.2
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 25 9.5
SPCC1183.09c |pmp31|mug75|plasma membrane proteolipid Pmp31|Schi... 25 9.5
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/110 (24%), Positives = 54/110 (49%)
Frame = +3
Query: 306 LTDGEVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWAL 485
LT+G ++ +A L + L D GRKP + S + ++ ++++++ W +
Sbjct: 124 LTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHM 183
Query: 486 VLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLY 635
++ R ++G + + + PLY EI+ +RG L + L AG + Y
Sbjct: 184 IVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAY 233
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 45.2 bits (102), Expect = 8e-06
Identities = 28/110 (25%), Positives = 52/110 (47%)
Frame = +3
Query: 306 LTDGEVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWAL 485
L+ G+ + +A + + +L D VGRK LL ++ V+ V+ +S +
Sbjct: 117 LSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMM 176
Query: 486 VLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLY 635
V+ R +VG + + + P+Y E++ +RG L + +F G L Y
Sbjct: 177 VVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAY 226
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 44.4 bits (100), Expect = 1e-05
Identities = 35/158 (22%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Frame = +3
Query: 192 ILCAVLINLPVFAYGASIGWMSPMTLL--LQSPNSPRDPPLTDGEVSWMGAAAYLTCVP- 362
I+ V +++ + +GA G + +T + QS + R P+TD +T +
Sbjct: 7 IVMLVFVSMAGWMFGADTGSIGGITNMRDFQSRFADRYNPVTDSYSYSSARQGLITGMVN 66
Query: 363 -ADYFMAFLG----DRVGRKPALLFVSSVAVLCWVLKLSSMETWA-LVLARALVGITMAG 524
+F FL DR+G++ +++F + V ++ +L+++++ +W +++A+ G+++
Sbjct: 67 VGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGLSIGA 126
Query: 525 SYVTCPLYTKEISEDSVRGLLGSVVTLFHCA--GNLFL 632
V P + E++ +R G++VT + A G +F+
Sbjct: 127 LSVLAPGFQSEVAPADLR---GTIVTTYQLAVTGGIFI 161
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 44.0 bits (99), Expect = 2e-05
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 174 GSKINQILCAVLINLPVFAYGASIGWMSPMTLL--LQSPNSPRDPPLTDGEV--SWMGAA 341
G + +L V I++ + GA G +S + + QS + R P+T+ +W A
Sbjct: 2 GRTLTSVL-VVFISMAGWLGGADTGSISGILGMRDFQSRFADRYNPITNSYSYSAWRQAL 60
Query: 342 AYLTCVPADYFMAFLG----DRVGRKPALLFVSSVAVLCWVLKLSSMETWA-LVLARALV 506
T F A L + +G+K ++ F S ++ +L ++++ +W +++ +
Sbjct: 61 LTGTVNAGCLFGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTAVPSWVQIMVGKLFT 120
Query: 507 GITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNL 626
G+T+ V P Y E++ +RG + S LF G L
Sbjct: 121 GLTIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQTCGTL 160
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/102 (28%), Positives = 41/102 (40%)
Frame = +3
Query: 318 EVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLAR 497
+VSW A ++C D GRK LL V + L +S W LV AR
Sbjct: 125 QVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAAR 184
Query: 498 ALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGN 623
A+ GI G T + +I RG ++ +F G+
Sbjct: 185 AIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGS 226
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 41.1 bits (92), Expect = 1e-04
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Frame = +3
Query: 177 SKINQILCAVLINLPVFAYGASIGWMSPMTLL--LQSPNSPRDPPLTDGEVSWMGAAAYL 350
+KI I+ V +++ + +GA G + +T + QS + R P+TD S+ A L
Sbjct: 2 AKILTIVMLVFVSMAGWMFGADTGSIGGITNMRDFQSRYADRYDPVTD-TYSYSSARQGL 60
Query: 351 ------TCVPADYFMAF-LGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA-LVLARALV 506
T ++ LGDR G++ ++ + V + +++L+++ +W +++A+
Sbjct: 61 LVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPSWVQMMVAKIWT 120
Query: 507 GITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAG 620
G+ + V P Y E S +RG + + LF G
Sbjct: 121 GLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLG 158
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 40.3 bits (90), Expect = 2e-04
Identities = 36/162 (22%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Frame = +3
Query: 192 ILCAVLINLPVFAYGASIGWMSPMTLL--LQSPNSPRDPPLTD---------GEVSWMGA 338
I+ V +++ + +GA G + +T + QS + R P+TD G ++ M
Sbjct: 7 IVMLVFVSMAGWMFGADTGSIGGITNMRDFQSRFADRYNPVTDTYSYSSARQGLITGMVN 66
Query: 339 AAYLT-CVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA-LVLARALVGI 512
+T C+ + M DR+G++ +++F + V ++ +L+++++ +W +++A+ G+
Sbjct: 67 VGSMTGCILSSPLM----DRIGKRVSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGL 122
Query: 513 TMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCA--GNLFL 632
+ V P + E++ ++R G++VT + A G +F+
Sbjct: 123 AIGALSVLAPGFQSEVAPATLR---GTIVTTYQLAVTGGIFI 161
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 34.7 bits (76), Expect = 0.012
Identities = 31/155 (20%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = +3
Query: 177 SKINQILCAVLINLPVFAYGASIGWMSPMTLL--LQSPNSPRDPPLTDGEVSWMGAAAYL 350
SK I + +++ + +GA G + +T + QS + R P+TD +
Sbjct: 2 SKTLTITMLLFVSMAGWMFGADTGSIGGITNMRDFQSRFADRYNPVTDTYSYSSARQGLI 61
Query: 351 TCVP--ADYFMAFLG----DRVGRKPALLFVSSVAVLCWVLKLSSMETWA-LVLARALVG 509
T + +F + DR+G++ +++ + ++ +++++++ +W +++A+ G
Sbjct: 62 TGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQVTAVPSWVQIMVAKIWTG 121
Query: 510 ITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHC 614
+ + V P Y E++ +RG + VVT C
Sbjct: 122 LGIGALSVLAPGYQSEVAPPHIRGTI--VVTYQLC 154
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 29.5 bits (63), Expect = 0.44
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +3
Query: 294 RDPPLTDGEVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLS--- 464
+ P G + AAA + V F+GD GRK V ++ VL ++
Sbjct: 81 KKPHYPSGIHGLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPK 140
Query: 465 SMET------WALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNL 626
S+ T W + R L+G+ + G Y T E S S RG L S+V F G L
Sbjct: 141 SIPTPLGKMMW-IFAWRWLLGLGIGGDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTL 199
>SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 342 AYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGI 512
AYL +P +YF +FLG + L S +LK W L +G+
Sbjct: 2 AYLIDIPFEYFSSFLGVHPDQLKLLFCFLSAYPFAGILKRLPSAPWIRNLFSISIGL 58
>SPAC1751.02c |rsm19||mitochondrial ribosomal protein subunit
S19|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -2
Query: 151 DFMMSEKECVESNVAVLTAVRAS 83
DF ++ ++C++ NV + TAVR++
Sbjct: 35 DFGVNVQQCIKGNVPIKTAVRSA 57
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -2
Query: 619 PAQWNNVTTLPSRPRTESSLISLV*SGQVT*-LPAIVMPTRARASTSAHVSID-DSFSTQ 446
P++ + + SR T IS SG+ + LP+ V+PTR+ +S+ S + +S S+
Sbjct: 433 PSRQQYIGSSNSRFNTRHQTISTPVSGRASNDLPSPVVPTRSNSSSILQPSYNLNSHSSD 492
Query: 445 HRTATEETNRS 413
R ++ S
Sbjct: 493 RRNTNDDDQSS 503
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 324 SWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMET--WALVLAR 497
SW+G A L F + + VGRK +L+ S V L + + W LVL R
Sbjct: 128 SWIGTAYTLAQTSILPFCGIMSEVVGRK-IVLYTSIVLFLFGSAMCGAAQNMLW-LVLCR 185
Query: 498 ALVGITMAG 524
A+ GI G
Sbjct: 186 AVQGIGGGG 194
>SPAC5D6.04 |||auxin family transmembrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 234 GASIGWMSPMTLLLQSPNSPRDPPLTDGEVSW 329
G ++ W +LL SPN P D PL G SW
Sbjct: 169 GQALRWSYGYRILL-SPNQPED-PLPIGNRSW 198
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 286 FGDCSSRVMGDIQPMLAPYANTGRFMSTAHRIWLILLPSRKKK**DFMMSEKECVE 119
+G+ + V DI+P++ P + T ++W LPS K + + + K+ VE
Sbjct: 76 YGNIKASV-NDIEPIVLPDEELCQLRLTNMKLWNCKLPSLKDEAEFYSLFSKKIVE 130
>SPCC1183.09c |pmp31|mug75|plasma membrane proteolipid
Pmp31|Schizosaccharomyces pombe|chr 3|||Manual
Length = 105
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 183 INQILCAVLINLPVFAYGASIGWMSPMTLLLQSPNSPRDP 302
IN LCA + +P + I P T+ L NSP DP
Sbjct: 36 INICLCA--LGIPGIIHAIYIVIKYPRTVRLDIENSPNDP 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,384,530
Number of Sequences: 5004
Number of extensions: 43496
Number of successful extensions: 147
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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