Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13c06
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 46 2e-05
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 41 7e-04
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 39 0.003
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 38 0.005
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 37 0.014
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.044
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 34 0.076
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 31 0.54
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 31 0.71
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 29 3.8
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 29 3.8
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 28 5.0
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 28 5.0
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 28 5.0
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 27 8.7
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 27 8.7
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 27 8.7
AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/99 (28%), Positives = 40/99 (40%)
Frame = +3
Query: 336 AAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGIT 515
AA Y+ + LGDR+GRK + + C L + W LARA G +
Sbjct: 138 AAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVIQITCAYLIAIAPYWWLYALARAGTGFS 197
Query: 516 MAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFL 632
G +V + E+ R L + LF G +FL
Sbjct: 198 HPGIFVIAVVIGMELVGPKYRKLASVITGLFFALGQIFL 236
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 357 VPADYFMAFLGDRVGRKPAL---LFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGS 527
+PA + + L DR+GR+ L LF++ +L L +++ W + A ++ G
Sbjct: 408 IPALFIVYLLIDRIGRRLILAGGLFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSITGV 467
Query: 528 YVTCPLYTKEISEDSVR 578
Y Y+ E+ +R
Sbjct: 468 YAAIYTYSPELFPTVIR 484
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA---LVLARALVGITMAGSYVTCPLYT 551
+L D+VGR+ AL + + +A+ L + A ++L R ++G+ S P++
Sbjct: 119 WLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFL 178
Query: 552 KEISEDSVRGLLGSV 596
EIS +++RG+LGS+
Sbjct: 179 TEISPNNLRGMLGSL 193
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA---LVLARALVGITMAGSYVTCPLYT 551
+L D+VGR+ AL + + +A+ L + A ++L R ++G+ S P++
Sbjct: 101 WLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFL 160
Query: 552 KEISEDSVRGLLGSV 596
EIS +++RG+LGS+
Sbjct: 161 TEISPNNLRGMLGSL 175
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 312 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 479
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 139 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 198
Query: 480 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+ +A G T G Y + E+ R + + +F G + L V+
Sbjct: 199 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVM 252
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 312 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 479
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 105 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 164
Query: 480 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+ +A G T G Y + E+ R + + +F G + L V+
Sbjct: 165 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVM 218
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 312 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 479
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 139 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 198
Query: 480 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+ +A G T G Y + E+ R + + +F G + L V+
Sbjct: 199 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVM 252
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 312 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 479
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 105 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 164
Query: 480 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+ +A G T G Y + E+ R + + +F G + L V+
Sbjct: 165 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVM 218
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 390 DRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEISED 569
D +GR+ +L S++ + ++ +S+ L++ R L+GI + + + P+Y E +
Sbjct: 90 DYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPT 149
Query: 570 SVRGLLGSVVTLFHCAGNLFLYVVG 644
VRG+L + L G + + G
Sbjct: 150 HVRGMLVAAFALMISFGQVVANITG 174
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +3
Query: 369 YFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLY 548
+F DR GRKP ++ + + V V+ + +++ R +G+ + + + P+Y
Sbjct: 84 WFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVY 143
Query: 549 TKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDV 650
E S VRG L S + G + ++G V
Sbjct: 144 LGEASPTHVRGTLVSAFAMMISFGQVVANIMGGV 177
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWV-LKLSSMETW--ALVLARALVGITMAGSYVTCPLYT 551
FL D+ GRK LL+ + +A+L V L S + + +V R LVG+ + P++
Sbjct: 120 FLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNCGITSGLVPMFL 179
Query: 552 KEISEDSVRGLLGS 593
E++ ++RG GS
Sbjct: 180 TELAPANLRGKCGS 193
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +3
Query: 339 AAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITM 518
+ +L + + + +L D +GR+P +F + V +L + + + + R LVG +
Sbjct: 112 STFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAI 171
Query: 519 AGSYVTCPLYTKEI 560
AG+ Y E+
Sbjct: 172 AGTLTVGWTYASEM 185
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 34.7 bits (76), Expect = 0.058
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 318 EVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLA- 494
+ +W+ ++ + LGD GRKP F SV +L V +W + A
Sbjct: 95 DAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVAS-GFAPSWEVFAAF 153
Query: 495 RALVGITMAGSYVTCPLYTKEISEDSVRGLLGS 593
R +VG ++A + Y E E R L S
Sbjct: 154 RFIVGTSIASILIVFYAYILEFIEPEQRVFLRS 186
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = +3
Query: 390 DRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEISED 569
D +GRK ++ S + ++ ++ L++ R L+G+ + + + P+Y E S
Sbjct: 93 DFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPS 152
Query: 570 SVRGLLGSVVTLFHCAGNLFLYVVG 644
+RG L + L G + ++G
Sbjct: 153 HIRGKLVTGFQLMITVGLVIANIIG 177
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 330 MGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVG 509
+ A ++ + + + FL D+ GR+ L + C VL + ++ + R L+G
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIG 177
Query: 510 ITMAGSYVTCPLYTKEI 560
I+++G+ Y E+
Sbjct: 178 ISVSGTLTVGWTYATEM 194
>Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical
protein ZK829.9 protein.
Length = 492
Score = 32.7 bits (71), Expect = 0.23
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Frame = +3
Query: 273 LQSPNSPRDPPLTDGEVSWM----GAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAV 440
L + + R PL EVS + +A YL V FL D GRK A +
Sbjct: 48 LNNSFTERYRPLDHEEVSLLKSGINSAWYLFQVVGAMSSPFLCDNYGRKVAFALSIAFMT 107
Query: 441 LCWVLK-LSSMETWA--LVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSV 596
L ++ L+S ++ L+ R + + S LY +EIS S+RG + S+
Sbjct: 108 LAGAMQMLASFTPYSEVLIAGRLIAAVFSPLSDAALILYLQEISPSSLRGTMSSL 162
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 TDGEVSWMGAAAYLTCVPADYFMAFLGDRVGRKPAL---LFVSSVAVLCWVLKLS 464
T + +W+ A L +P FL DR+GR+P + + VS V++L ++ ++
Sbjct: 352 TYSQATWLSFATGLLRLPFTLVPVFLVDRLGRRPLIIVSMLVSFVSILVMIIAIN 406
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 345 YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAG 524
Y+ + + + ++ D++GRK + + + L + A + RAL GI +AG
Sbjct: 116 YVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAG 175
Query: 525 SYVTCPLYTKEI 560
+ + Y E+
Sbjct: 176 TMIVGWAYFSEL 187
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = +3
Query: 372 FMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYT 551
FM+ L DR GRKP ++ + +A L + S ++ RA +G + T
Sbjct: 163 FMSMLADRYGRKPIIVTTAILAFLANMAASFSPNFAIFLILRAFIGACSDSYLSVASVAT 222
Query: 552 KEISEDSVRGLLGSVVTLFHCAGNLFLYVV 641
E + R + V + G ++ +V
Sbjct: 223 CEYLSEKARAWITVVYNVAWSLGMVWTLLV 252
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/87 (19%), Positives = 37/87 (42%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 560
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 174 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 233
Query: 561 SEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+S R G + +LF A L VV
Sbjct: 234 MGNSGRIFSGLMTSLFFGAAMALLGVV 260
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/87 (19%), Positives = 37/87 (42%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 560
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 157 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 216
Query: 561 SEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+S R G + +LF A L VV
Sbjct: 217 MGNSGRIFSGLMTSLFFGAAMALLGVV 243
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +3
Query: 321 VSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW-----AL 485
VS G A + C+ F G K L+ +++V ++ L L + W A
Sbjct: 88 VSSQGVGALIGCLIVSPISKF-----GAKDVLMRLNNVILIAGSL-LMFLSYWITFPIAF 141
Query: 486 VLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGN 623
++ R L G+ + PLY ++I +++G + + + C G+
Sbjct: 142 IVGRILTGVYTGLACAFAPLYLQQIIPKNIKGSMSCFLHIAVCFGS 187
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/87 (19%), Positives = 37/87 (42%)
Frame = +3
Query: 381 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 560
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 157 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 216
Query: 561 SEDSVRGLLGSVVTLFHCAGNLFLYVV 641
+S R G + +LF A L VV
Sbjct: 217 MGNSGRIFSGLMTSLFFGAAMALLGVV 243
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 495 RALVGITMAGSYVTCPLYTKEISEDSVRG-LLGSVVTL 605
R + I M+G+Y LY+ E+SED G L +V L
Sbjct: 287 RKIKKIVMSGTYWALSLYSTELSEDETTGYFLSGLVEL 324
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 129 SFSLIMKSYYFFFREGSKINQILCA 203
S+S KS+Y FF + KI ++LC+
Sbjct: 253 SWSQFRKSWYMFFYQNEKIPEMLCS 277
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 495 RALVGITMAGSYVTCPLYTKEISEDSVRG-LLGSVVTL 605
R + I M+G+Y LY+ E+SED G L +V L
Sbjct: 287 RKIKKIVMSGTYWALSLYSTELSEDETTGYFLSGLVEL 324
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +3
Query: 336 AAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWAL---VLARALV 506
AA +L + A M+ L R G + +S + V+ + TW+ V+ R L
Sbjct: 107 AAGFLGAIAAVVPMSRLTARFGVHKVMT-LSGILGTFLVVITPIVITWSFPVFVILRVLQ 165
Query: 507 GITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLF 629
GIT+A + T + E + + +GL SV++ G +F
Sbjct: 166 GITLANLFTTAGVVVNEWAAVNEKGLFISVLSAHVEMGAVF 206
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 LPVFAYGASIGWMSPMTLLLQSPNS---PRDPPLTDGEVSWMGAAAYLTCV 359
+P F GA+ G + T+++ P P PP+ G + +GAAAY V
Sbjct: 427 VPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPIHPGLYAVVGAAAYTGAV 477
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 LPVFAYGASIGWMSPMTLLLQSPNS---PRDPPLTDGEVSWMGAAAYLTCV 359
+P F GA+ G + T+++ P P PP+ G + +GAAAY V
Sbjct: 458 VPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPIHPGLYAVVGAAAYTGAV 508
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 LPVFAYGASIGWMSPMTLLLQSPNS---PRDPPLTDGEVSWMGAAAYLTCV 359
+P F GA+ G + T+++ P P PP+ G + +GAAAY V
Sbjct: 427 VPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPIHPGLYAVVGAAAYTGAV 477
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 LPVFAYGASIGWMSPMTLLLQSPNS---PRDPPLTDGEVSWMGAAAYLTCV 359
+P F GA+ G + T+++ P P PP+ G + +GAAAY V
Sbjct: 458 VPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPIHPGLYAVVGAAAYTGAV 508
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 474 TWALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLL 587
TWA ++ + + CP Y++ + D V+GLL
Sbjct: 510 TWAAYAITSIQDYAVCCMQLMCPAYSEVLPSDCVKGLL 547
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 216 LPVFAYGASIGWMSPMTLLLQSPNS---PRDPPLTDGEVSWMGAAAYLTCV 359
+P F GA+ G + T+++ P P PP+ G + +GAAAY V
Sbjct: 427 VPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPIHPGLYAVVGAAAYTGAV 477
>AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical
protein C09D4.1a protein.
Length = 586
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 373 SWPSSETGSAGSRRFCSSP 429
+W SSE+GSA S R SSP
Sbjct: 35 AWTSSESGSAHSSRVSSSP 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,132,490
Number of Sequences: 27780
Number of extensions: 274608
Number of successful extensions: 1011
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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