Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13b23
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   6.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   8.6  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 297 ESLGDCQALTHHCTAL 344
           + +  CQA+  HC+ L
Sbjct: 31  DGMNQCQAVNGHCSHL 46


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 297 ESLGDCQALTHHCTAL 344
           + +  CQA+  HC+ L
Sbjct: 31  DGMNQCQAVNGHCSHL 46


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 305 ERFYTIFRGAESFYSTKLE 249
           + F    R  E++YS KLE
Sbjct: 540 DSFQAALRSIENYYSGKLE 558


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 305 ERFYTIFRGAESFYSTKLE 249
           + F    R  E++YS KLE
Sbjct: 578 DSFQAALRSIENYYSGKLE 596


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 195 VWRRTLHSRLVHFS 154
           VW+ TL++RLV  S
Sbjct: 907 VWQVTLNARLVELS 920


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 124 HFTLQRYADACFISLKFI 71
           H T+    D CF  LKFI
Sbjct: 72  HPTIIMPQDVCFNDLKFI 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,768
Number of Sequences: 438
Number of extensions: 2166
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)