Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13b18
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 150 2e-37
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 100 2e-22
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 46 4e-06
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 44 1e-05
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 43 3e-05
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 43 5e-05
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 42 1e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 40 4e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 38 0.001
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 38 0.001
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 38 0.001
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 37 0.002
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 36 0.005
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.007
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.012
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 34 0.016
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 32 0.065
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 32 0.085
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 32 0.085
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 32 0.085
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 31 0.15
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.20
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.26
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 30 0.26
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.46
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.46
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 29 0.60
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 29 0.60
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 29 0.60
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 0.60
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 0.80
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.80
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 28 1.1
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 28 1.4
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 1.8
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 1.8
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 1.8
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 2.4
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 27 2.4
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 2.4
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 27 2.4
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 2.4
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 3.2
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 3.2
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 27 3.2
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 3.2
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 4.2
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 4.2
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 26 5.6
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 5.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 7.4
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 25 7.4
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 9.8
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 9.8
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 25 9.8
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 25 9.8
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 150 bits (363), Expect = 2e-37
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 9/180 (5%)
Frame = +1
Query: 85 AQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWD-TDGHGGWRMTASWKAHHGSVWK 261
A TI +H+DL++DV YDFYG RM +CS+DQ VK++D D W +T+ W+A S+ +
Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMR 65
Query: 262 VTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKF 441
V WAHP FGQV+A CS DR I+EE + +TW++ + L+D+R++V D+ F
Sbjct: 66 VAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFES------KTWVEVAKLMDARSAVLDISF 119
Query: 442 GPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWTLQHEI---PTKVSIS-----CLSWNPS 597
P G L SAD +RIYEA + NL WTL +EI P+ S + C++W PS
Sbjct: 120 CPFQHGCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPS 179
Score = 29.5 bits (63), Expect = 0.46
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 163 CSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQ---VIATCSFDRTAAIW 333
C +D Y I+ + HG W+ A H + + WA P G +IAT D I+
Sbjct: 190 CMNDAY--IYKQNSHGKWKKVAELPGHTDLIRDICWA-PSMGSSYYLIATACKDGNVRIF 246
Query: 334 E 336
+
Sbjct: 247 K 247
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 100 bits (239), Expect = 2e-22
Identities = 47/142 (33%), Positives = 75/142 (52%)
Frame = +1
Query: 91 TIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTW 270
T+ H D+IHD D+YG+R+ATCSSDQ +K++ + + + + + H G VW++ W
Sbjct: 3 TVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIE-NNQQTLLETLRGHSGPVWQLGW 61
Query: 271 AHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPK 450
AHP+FG ++A+ S+D +W E G W + + + SV V + P
Sbjct: 62 AHPKFGTILASASYDGHVIVWRETGG-----------VWSELMDHTAHQASVNAVSWAPH 110
Query: 451 HLGLLLVTCSADGIIRIYEAPD 516
G LL S+DG + + E D
Sbjct: 111 EYGALLACASSDGKVSVLEFKD 132
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +1
Query: 100 ADHKDLIHDVAY----DFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSV-WKV 264
A H D DVA+ +A+ S D+ V IW +G G W+ T + + W+V
Sbjct: 202 AGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRV 261
Query: 265 TWAHPEFGQVIATCSFDRTAAIWEE 339
+W+ G ++A D +++E
Sbjct: 262 SWSLS--GNILAVSCGDNKVYLFKE 284
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 46.4 bits (105), Expect = 4e-06
Identities = 28/105 (26%), Positives = 51/105 (48%)
Frame = +1
Query: 43 IITMSENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRM 222
+++++E I + +E H++ + +A+ G +ATCS D+ V IW+ +
Sbjct: 357 VVSINEKIDDD-WECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDC 415
Query: 223 TASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTA 357
A + H V VTW HP ++ + S+D + W + GD A
Sbjct: 416 LAVLQEHTQDVKVVTW-HPT-EDLLVSGSYDNSICFWRDDGDDWA 458
Score = 32.7 bits (71), Expect = 0.049
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 8/166 (4%)
Frame = +1
Query: 79 FEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVW 258
F+ + +H + V + + + + S D + W DG W +T + H +VW
Sbjct: 413 FDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDD-WALTCQLQGHTNTVW 471
Query: 259 KVTWAHPEFGQVIATCSFDRTAAIWEEVG---DTTATGSEKSLRTWLKRSNLVDSRTSVT 429
+ ++ P G +A+ D +W ++ D S LR L+ +TS+
Sbjct: 472 ALAFS-PN-GNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEE--WKQQTSLP 527
Query: 430 DVKFGPKHL-----GLLLVTCSADGIIRIYEAPDVMNLAQWTLQHE 552
+ G + L + DG I +Y+ + + A W + +E
Sbjct: 528 HIHKGAVYTISWMNDATLCSAGGDGKIVVYQR-EKHDEALWHVAYE 572
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 44.4 bits (100), Expect = 1e-05
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Frame = +1
Query: 226 ASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNL 405
AS KAH +W +WA E G AT S D+ W ++ D +L+
Sbjct: 618 ASIKAHSRIIWDASWAPKEMGYFFATASRDKFVKFW-KINDNKKICDVAALQ-------- 668
Query: 406 VDSRTSVTDVKFGP--KHLGLLLVTCSADGIIRIYEAPDVMNLAQW---TLQHEIPTKVS 570
+VT V F P + LLL + G I I+ P NL +W L + S
Sbjct: 669 --FSDAVTAVDFAPFFHNDELLLAVGTEAGKIFIWRCPR-ENLTKWYPTRLPDHMAPMES 725
Query: 571 ISCLSWNPSLSRVGNPPMLAVGSD 642
I+ + W P+ +G +L G D
Sbjct: 726 INQILWKPTFETMGLYSLLIAGED 749
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +1
Query: 157 ATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 336
A+CS+D +K+W +DG + + H V+ +T+ H + Q+IA+C DRT IW+
Sbjct: 190 ASCSNDGVIKLWTSDGEFLYEL----HGHTSFVYSLTYIHNQ--QLIASCGEDRTIRIWK 243
Score = 25.0 bits (52), Expect = 9.8
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIW 192
H ++ + Y + +A+C D+ ++IW
Sbjct: 214 HTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H ++ + + + +CS D ++W D ++K H G VW V A F
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK---TALVAYKGHTGPVWDV--AFGPF 432
Query: 286 GQVIATCSFDRTAAIW 333
G AT S D+TA +W
Sbjct: 433 GHYFATASHDQTAQLW 448
Score = 40.3 bits (90), Expect = 2e-04
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +1
Query: 40 FIITMSENIATNLFEAQT-----IHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDG 204
++++ SE+ + L+ T + H + DVA+ +G AT S DQ ++W D
Sbjct: 393 YLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDH 452
Query: 205 HGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 336
R+ A H V VT+ HP V+ T S D+T +W+
Sbjct: 453 IYPLRVFA---GHLSDVDCVTF-HPNSAYVL-TGSSDKTCRLWD 491
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 100 ADHKDLIHDVAYDF-YGERMATCSSDQYVKIWDTDG-HGGWRMTASWKAHHGSVWKVTWA 273
+ H+ + DV + + + + +A+ S DQY+ + D + S AH G + V +
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF- 289
Query: 274 HPEFGQVIATCSFDRTAAIWE 336
+P ++ATCS D+T A+W+
Sbjct: 290 NPHNDFILATCSTDKTIALWD 310
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 148 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 327
E + +CS D + ++W D + H+ +W V ++ FG AT S D+TA
Sbjct: 416 EFILSCSEDGFTRLWSKDTKS---TIVKYAGHNAPIWDVQFS--PFGYYFATASHDQTAR 470
Query: 328 IWE 336
+W+
Sbjct: 471 LWD 473
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 94 IHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSV 255
+ H++ + V++ +AT SSD ++WD G R+ + AHH V
Sbjct: 482 VFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRV---FNAHHSPV 532
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +1
Query: 124 DVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIAT 303
D++YD + + TCS+D+ VKIW D G S AH S+ +VT+ + T
Sbjct: 583 DISYD--SKLLVTCSADKNVKIWGLD-FGDCH--KSIFAHQDSIMEVTFQPDTYN--FFT 635
Query: 304 CSFDRTAAIWE 336
CS DR W+
Sbjct: 636 CSKDREVRYWD 646
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H+D I +V + TCS D+ V+ WD + + + HH VW + P F
Sbjct: 617 HQDSIMEVTFQPDTYNFFTCSKDREVRYWDGK---SFDLILKLRGHHSEVWALA-VGPTF 672
Query: 286 GQVIATCSFDRTAAIWEEVGDTTATGSEK 372
+ + S D + +WE+ D E+
Sbjct: 673 ---VVSGSHDHSIRLWEQGDDLVFLEEER 698
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWD 195
HK + + +D G R+A+ S D + +WD
Sbjct: 103 HKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Frame = +1
Query: 61 NIATNLFEAQT------IHADHKDLIHD-----VAYDFYGERMATCSSDQYVKIWDTDGH 207
N A N+F+ QT +H + D D +A+ G+ + T + D+ +K+WD
Sbjct: 333 NQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQ 392
Query: 208 GGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 336
++ + H ++ + ++H G+ I + S DRTA +W+
Sbjct: 393 ---KVRYVFSGHEQDIYSLDFSHN--GRFIVSGSGDRTARLWD 430
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 37.9 bits (84), Expect = 0.001
Identities = 42/141 (29%), Positives = 61/141 (43%)
Frame = +1
Query: 154 MATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIW 333
+AT SSD +KIW +R+ + H+ + +V WA + +A+ S D+T IW
Sbjct: 69 IATSSSDGTIKIWSA---LTFRLECTLFGHYRGISQVKWA--TGSKYLASASDDKTIRIW 123
Query: 334 EEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPKHLGLLLVTCSADGIIRIYEAP 513
+ S+R +N V S + F P LG LLV+ S D +RI+
Sbjct: 124 D-------FEKRCSVRCLKGHTNYVSS------IDFNP--LGTLLVSGSWDETVRIWNLQ 168
Query: 514 DVMNLAQWTLQHEIPTKVSIS 576
D L E VSIS
Sbjct: 169 DGTCLRMLPAHSEPIISVSIS 189
Score = 29.1 bits (62), Expect = 0.60
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H + + + ++ G + + S D+ V+IW+ RM AH + V+ +
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLP---AHSEPIISVSISAD-- 191
Query: 286 GQVIATCSFDRTAAIWE 336
G + AT S+D A IW+
Sbjct: 192 GTLCATASYDGMARIWD 208
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H ++DV Y ER A+ +D K++ DG G ++ AH GS++ ++W+ P+
Sbjct: 188 HSKFVYDVRYSPNDERFASAGADG--KVYVFDGKTGDQVYEI-DAHKGSIFSISWS-PDS 243
Query: 286 GQVIATCSFDRTAAIWE 336
Q + T S + IW+
Sbjct: 244 SQFV-TSSAGYSCKIWD 259
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.9 bits (79), Expect = 0.005
Identities = 32/134 (23%), Positives = 61/134 (45%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H+ L D+ YD + A+C D+++++WD + R A ++ + E
Sbjct: 57 HEILDLDLVYD--STKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTI-----RYNED 109
Query: 286 GQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPKHLGLL 465
++A+ SFD +W+ + S ++ L D++ SV+ + +H L
Sbjct: 110 SSILASGSFDSKVRLWD-----CRSNSFSPIQV------LADAKDSVSSIDIA-EH---L 154
Query: 466 LVTCSADGIIRIYE 507
+VT S DG +R Y+
Sbjct: 155 IVTGSTDGTLRTYD 168
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.007
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 282
H D + D+ G + T SSD +K+W + S+ AH SVW + HP+
Sbjct: 215 HTDNVRDILISDDGRTILTASSDATIKLWSLRAQ---KCLFSFIAHSDSVWALYSEHPD 270
Score = 29.1 bits (62), Expect = 0.60
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIW 192
H ++D+A E + +CSSD VK+W
Sbjct: 78 HSAWVNDIALTHDSEGVISCSSDSTVKLW 106
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.012
Identities = 28/120 (23%), Positives = 50/120 (41%)
Frame = +1
Query: 85 AQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKV 264
AQ H + D A F + S D+ +++WD + T + H V V
Sbjct: 55 AQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKG---ECTHQFVGHTSDVLSV 111
Query: 265 TWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFG 444
+ + P+ QV++ S D+T IW +G+ T ++ W+ + ++T V G
Sbjct: 112 SIS-PDNRQVVSG-SRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAG 169
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.016
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 148 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 327
+ +ATCS+D V IW T+ + + + H VW ++ + T S D A
Sbjct: 228 KHLATCSADATVNIWSTEDM-SFMLERRLQGHQRWVWDCAFSAD--STYLVTASSDHVAR 284
Query: 328 IWE 336
+WE
Sbjct: 285 LWE 287
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H + + +A+ G+ +AT S D VK+WD R H S HP
Sbjct: 82 HTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQR-----NYDHKSPVNDLLIHPNQ 136
Query: 286 GQVIATCSFDRTAAIWEEVGDTTAT 360
G+++ +C W ++G+ + T
Sbjct: 137 GELL-SCDQSGRVRAW-DLGENSCT 159
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 32.3 bits (70), Expect = 0.065
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +1
Query: 103 DHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 282
+H I +A+ G ++AT S+D VKIWD + + AH V V +
Sbjct: 347 EHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVS---LAHTIPAHSSLVSDVRYIESG 403
Query: 283 FGQVIATCSFDRTAAIW 333
+ IAT +D +W
Sbjct: 404 VNRFIATSGYDGCVKLW 420
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 31.9 bits (69), Expect = 0.085
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERM-ATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 282
H D+++DV + E + A+ S D ++I DT + +AH ++ V +P
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVA-INPF 292
Query: 283 FGQVIATCSFDRTAAIWE 336
++AT S D+T A+W+
Sbjct: 293 NDYLLATASADKTVALWD 310
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 31.9 bits (69), Expect = 0.085
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +1
Query: 88 QTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVT 267
+ I HK +H +A + +C Q V +W+ + + +R + H W +
Sbjct: 52 EEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETN-EFRDLGNNAQHPSECWS-S 109
Query: 268 WAHPEFGQVIATCSFDRTAAIWEEVGD 348
P+ GQ IA S D A+W+ D
Sbjct: 110 CISPD-GQTIAFTSVDGRIAVWDNPSD 135
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTW 270
H I VA++ G+ + + + +KIWD D ++ G++W V W
Sbjct: 228 HAAWIFAVAFNPVGDLLLSADVEGKIKIWDID---TMECISTQSETDGAIWAVAW 279
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.9 bits (69), Expect = 0.085
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 55 SENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTD-GHGGWRMTAS 231
S + + E ++ ++ A D+ + S D +I+ T +GGW+ +S
Sbjct: 226 SPGVMVSRKENSPLYTVNRHKTEGYALDWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSS 285
Query: 232 -WKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 336
+ +H +V + W+ P V ++CS D T IW+
Sbjct: 286 PFLSHTAAVEDLQWS-PSEKNVFSSCSCDGTFRIWD 320
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
HKD I + + F G +AT D V++W + G+ +++ VW ++W HP+
Sbjct: 103 HKDSIVAIDWSFDGTYIATGGMDSQVRLWKSS--TGFEFITAFETVDEIVW-LSW-HPK- 157
Query: 286 GQVIATCSFDRTAAIW 333
G +A D + +W
Sbjct: 158 GLFLAAGCNDGSIWMW 173
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 145 GERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAH--PEFGQVIATCSFDR 318
GER+ + S D + +WD + T HG V A P+ G+ IAT SFD
Sbjct: 358 GERLVSASDDLQLILWDPQ-----KSTKPITKMHGHQKVVNHASFSPD-GRCIATASFDS 411
Query: 319 TAAIWE-EVGDTTAT 360
+ +W+ + G AT
Sbjct: 412 SVRLWDGKTGKFLAT 426
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIW 192
H+D + V + G+R+A+ +D+ V+IW
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.26
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +1
Query: 124 DVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIAT 303
+V D++ + A + + + + + ++AH + + ++HP FG +AT
Sbjct: 292 EVVSDYFEQNSAFSKAPENTESSVNQNYIVGNLVKQFQAHSEYITSLDFSHP-FG-TLAT 349
Query: 304 CSFDRTAAIWEEVG 345
S D+T +W+ G
Sbjct: 350 ASTDKTVKVWDMAG 363
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H + I + + +AT S+D+ VK+WD G S K H V F
Sbjct: 331 HSEYITSLDFSHPFGTLATASTDKTVKVWDM---AGVVYLGSLKGHSDYV-SCLAIQDSF 386
Query: 286 GQVIATCSFDRTAAIW 333
IAT S D T +W
Sbjct: 387 ---IATGSMDTTVRLW 399
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 202 RLCPISLRIDHWNKWPFSPRRSRTRHRE*GLCDRHVS 92
RLC S + HW K+P +S H E +CD ++S
Sbjct: 21 RLCCCSPQTSHWCKYPALCLKSPDTHNENLVCDAYLS 57
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.5 bits (63), Expect = 0.46
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H D + + Y G+R+ T + D +K+WD + G+ ++ H +V + ++ +
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDM--NSGF-CIVTFTQHTSAVSGLCFS--KR 392
Query: 286 GQVIATCSFDRTAAIWE 336
G V+ + S D + W+
Sbjct: 393 GNVLFSSSLDGSVRAWD 409
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.5 bits (63), Expect = 0.46
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 73 NLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGS 252
NL + + A H+ + DVA+ + T S D +K+W+ H H
Sbjct: 153 NLNNVKIVQA-HEMEVRDVAFSPNDSKFVTASDDGSLKVWNF--HMSTE-ELKLTGHGWD 208
Query: 253 VWKVTWAHPEFGQVIATCSFDRTAAIWE-EVGDTTAT 360
V V W HP G ++A+ S D W+ G AT
Sbjct: 209 VKTVDW-HPSKG-LLASGSKDNLVKFWDPRTGTCIAT 243
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.60
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 73 NLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDT 198
N+ E A + + I VA+ RMAT S D+ +++WD+
Sbjct: 50 NINEKHREAAAYGEAIRQVAFSKDYSRMATVSEDKCLRLWDS 91
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 29.1 bits (62), Expect = 0.60
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 424 VTDVKFGPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWT--LQHEIPTK---VSISCLSW 588
VTD+ + +VTCS DG++ I+E PD+ + T L ++ + + +CLS+
Sbjct: 294 VTDITYINNPPSNNIVTCSTDGLVHIWE-PDMFSRPSETICLSSQVDSSSQCIPATCLSF 352
Query: 589 NP 594
P
Sbjct: 353 IP 354
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 94 IHADHKDLIHDVAY--DFYGERMATCSSDQYVKIWDTD 201
I H + + D+ Y + + TCS+D V IW+ D
Sbjct: 286 ISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWEPD 323
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 29.1 bits (62), Expect = 0.60
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +1
Query: 100 ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHP 279
+DH ++ V + R+ TCS D+ +++ G W+ T + + V W+
Sbjct: 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111
Query: 280 E-------FGQVIATCSFDRTAAIW 333
E +VI+ C F++ W
Sbjct: 112 EDKFAVGSGARVISVCYFEQENDWW 136
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.1 bits (62), Expect = 0.60
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
HKD I V G+ + + S D+ ++ W D + + H+ SV V P
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP---HSQLTLQGHNNSVISVA-VSPN- 565
Query: 286 GQVIATCSFDRTAAIW 333
G AT S D A IW
Sbjct: 566 GHCFATGSGDLRARIW 581
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.7 bits (61), Expect = 0.80
Identities = 24/113 (21%), Positives = 43/113 (38%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H D + + + +CS DQ ++IW+ A H V + HP
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSR---NCIAILTGHSHYVMCAAF-HPS- 148
Query: 286 GQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFG 444
+I + S D+T +W+ G + S+ L + S+++ FG
Sbjct: 149 EDLIVSASLDQTVRVWDISGLRMKNAAPVSMSL---EDQLAQAHNSISNDLFG 198
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 28.7 bits (61), Expect = 0.80
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 82 EAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTD 201
E Q H+D + +A M +CS+D+ +K+W D
Sbjct: 241 EPQHCWKHHRDAVMGLAMRRGTNEMFSCSADRSIKVWSLD 280
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 285
H+ + + D +AT ++ VK+WD G +T S++ H G + + + +
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDI---AGAYVTHSFRGHGGVISALCFGKHQN 158
Query: 286 GQVIATCSFDRTAAIWE 336
V+A+ + D +W+
Sbjct: 159 TWVLASGADDSRVRLWD 175
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 94 IHADHKDLIHDVAYD-FYGERMATCSSDQYVKIW 192
+HA HK +++V +D F + +A+ + D + IW
Sbjct: 368 VHAGHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 100 ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDT 198
A H ++ V Y G +A+C D+ ++IWD+
Sbjct: 218 AAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDS 250
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 238 AHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGD 348
AH+G V V ++ P G +A+C D+T IW+ +
Sbjct: 219 AHNGVVLCVNYS-PN-GVFLASCGRDKTIRIWDSTSN 253
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +1
Query: 151 RMATCSSDQYVKIWD--TDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTA 324
+ ATC D ++IW T S + H V +PE G ++AT + T
Sbjct: 33 KFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPE-GNILATAGDEGTI 91
Query: 325 AIW 333
+W
Sbjct: 92 MLW 94
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 1.8
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +1
Query: 85 AQTIHA--DHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHG-----GWRMTASWKAH 243
A+ IH H + I V + +AT S DQ K++D G R + +H
Sbjct: 170 ARRIHGWLAHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSH 229
Query: 244 HGSVWKVTWAHPEFGQVIATCSFDRTAAIWE-EVGDTTATGS--EKSLRTWLKRSNLVDS 414
SV +V + + +++ CS D + W+ T G +K + K
Sbjct: 230 --SVKQVNFCNDSPYNLVS-CSRDGSIIFWDMRTHGITIDGEHFQKPVLRIRKAHENSGR 286
Query: 415 RTSVTDVKFGPKHLGLLLVTCSADGIIRIYE 507
S+T + P+ ++ +CSA+ +++++
Sbjct: 287 DCSITSATWLPQSTSQVISSCSANSALKLWD 317
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 154 MATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIW 333
++TCS + I+DT + S + H G VW + G + T S DRT +W
Sbjct: 421 VSTCSPR--INIYDTKTGV---LIRSLEEHEGDVWTFEYV----GDTLVTGSTDRTVRVW 471
Query: 334 E 336
+
Sbjct: 472 D 472
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 253 VWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKS 375
V KV + HPEF + T S ++W +G+ A G ++
Sbjct: 251 VSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRT 291
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 97 HADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHH 246
HAD IH A + ++A S D K D H WKA H
Sbjct: 393 HADETPFIHPAAIELCARKVAASSGD-LRKALDICRHAIELAEREWKAQH 441
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 196 CPISLRIDHWNKWPFSPRRSRTRH 125
CP+ + +D + SPRRS TRH
Sbjct: 868 CPLDMNLDAKHCISVSPRRSLTRH 891
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 454 LGLLLVTCSADGIIRIYEAPD-VMNLAQWTLQHEIPTKVSISCLSWNPSLSR 606
+ +LL CS + I+R YE V L Q L+H I LS NP ++
Sbjct: 127 VSILLAFCSEEAILRSYEVKKRVSTLLQCCLKHYDLCIPVICTLSSNPKSAK 178
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTD 201
H I D+++ G + S D+ +K+WDT+
Sbjct: 309 HARPIRDLSFSQDGRSFLSTSFDKTIKLWDTE 340
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 3.2
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 106 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGH-GGWRMTASWK-AHHG---SVWKVTW 270
HKD+I +A G + + S D V+I+D R ++ A HG ++ V W
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAW 277
Query: 271 AHPEFGQVIATCSFDRTAAIWEEVGD 348
+ + + S D+ +W GD
Sbjct: 278 SRN--SRFVGAGSSDKNVYVWSATGD 301
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 26.6 bits (56), Expect = 3.2
Identities = 29/112 (25%), Positives = 45/112 (40%)
Frame = +1
Query: 43 IITMSENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRM 222
I E + T +T HAD H A + A S+ Q +I +++
Sbjct: 127 IYVKDEGLRTETIVKKTEHADSN---HQPAVSIEESKEAVESTSQSSEI-------SFKL 176
Query: 223 TASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSL 378
+ HH V + A GQ +A+ SFD T +W+ + G EKS+
Sbjct: 177 IKVIEGHHTFVGGL--AFDPMGQFLASQSFDHTLKVWK----LSTFGVEKSI 222
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 88 QTIH--ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWK 261
Q +H + HK + +A + ++ T S D +++WD T + HH +
Sbjct: 280 QNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAA----GKTLTTLTHHKKTVR 335
Query: 262 VTWAHPE 282
HP+
Sbjct: 336 ALSLHPD 342
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 457 GLLLVTCSADGIIRIYEAPD 516
GL L+TC AD ++IY+ D
Sbjct: 433 GLRLITCEADKSVKIYKQVD 452
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 88 QTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDG 204
QT D+ L + + AT SS+Q +KIWDT G
Sbjct: 1215 QTFSTDNSGLTSLTVHS-HAPVYATGSSNQSIKIWDTLG 1252
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 148 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 327
++ +S Q +W+ + H +V + W H + V+ATCS D +
Sbjct: 290 DQWVVSTSSQKTIVWNLALPNDRAIEFMLHGHTRAVTDMNW-HRQNPDVLATCSIDSSVH 348
Query: 328 IWE 336
W+
Sbjct: 349 CWD 351
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 364 SEKSLRTWLKRSNLVDS--RTSVTDV--KFGPKHLGLLLVTCSADGIIRIYEAPDVMNLA 531
++ ++ TW SNL + T V DV K++ + + S ++ +YE+ DVM+L
Sbjct: 185 NQMTIGTW---SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLI 241
Query: 532 Q 534
Q
Sbjct: 242 Q 242
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 226 ASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 336
A K H V V + HP V+A+ S D T +W+
Sbjct: 128 AELKGHSRKVGLVQY-HPTAANVLASSSADNTIKLWD 163
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/69 (20%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 449 LGPNLTSVT-EVLESTRFDRFSHVRKLFSEPVAVVSPTSSQIAAVLSKEQVAMTCPNSGW 273
LG +++ T E + ++ + ++ R ++SP S ++ VLS+ + ++ +S
Sbjct: 752 LGNKVSNPTKEFVSTSSYAPAANTRNAIIREPGILSPLSPRVQPVLSRRESIISMGSSAS 811
Query: 272 AHVTFQTEP 246
++V + P
Sbjct: 812 SYVPLEIAP 820
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 HPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRT 384
HP F ++ TC FDRT I++ G + LR+
Sbjct: 226 HPYF-PLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRS 261
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 147 PVEVVRDIVNKVFVIGMYRLGLEKVRSYVFTHCYYEL 37
PV + D++ K+ +G+ + L +VRS + YY++
Sbjct: 809 PVGIYNDLIIKLENLGIRLVVLNRVRSRFGLYLYYDV 845
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 407 TRFDRFSHVRKLFSEPVAVVSPTSSQIAAVLSKEQV 300
TR D F HV L S ++V+S S + L+ +Q+
Sbjct: 159 TRIDEFGHVYYLKSPQLSVISAISHEKLENLTPKQL 194
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 620 GGFPTLDNEGFHD 582
GGF TLD++GF D
Sbjct: 18 GGFSTLDDKGFQD 30
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +1
Query: 166 SSDQYVKIWDTDGHGG--------WRMTASWKAHHGS-VWKVTWAHPEFGQVIATCSFDR 318
S+DQ +++W TD G ++ K H+ + + W + ++ + S D
Sbjct: 131 STDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVS-SLDT 189
Query: 319 TAAIWEEVGDTTAT 360
T +W+ V + T
Sbjct: 190 TCTVWDIVAQQSKT 203
Score = 25.0 bits (52), Expect = 9.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 151 RMATCSSDQYVKIWDTD 201
++ATC D V +WD D
Sbjct: 330 KLATCGDDCVVSLWDLD 346
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,974,020
Number of Sequences: 5004
Number of extensions: 65014
Number of successful extensions: 314
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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