Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13b13
         (385 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X73424-1|CAA51825.1|  539|Homo sapiens propionyl-CoA carboxylase...    29   5.1  
S67325-1|AAB28900.1|  539|Homo sapiens propionyl CoA carboxylase...    29   5.1  
BC053661-1|AAH53661.1|  539|Homo sapiens propionyl Coenzyme A ca...    29   5.1  
BC013768-1|AAH13768.1|  539|Homo sapiens propionyl Coenzyme A ca...    29   5.1  
AL831978-1|CAD89898.1|  303|Homo sapiens hypothetical protein pr...    29   5.1  
AJ006487-1|CAA07066.1|  539|Homo sapiens propionyl-CoA carboxyla...    29   5.1  
AF217984-1|AAG17227.1|  302|Homo sapiens unknown protein.              29   5.1  
AB209009-1|BAD92246.1|  556|Homo sapiens Propionyl Coenzyme A ca...    29   5.1  

>X73424-1|CAA51825.1|  539|Homo sapiens propionyl-CoA carboxylase
           protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>S67325-1|AAB28900.1|  539|Homo sapiens propionyl CoA carboxylase
           beta subunit protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>BC053661-1|AAH53661.1|  539|Homo sapiens propionyl Coenzyme A
           carboxylase, beta polypeptide protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>BC013768-1|AAH13768.1|  539|Homo sapiens propionyl Coenzyme A
           carboxylase, beta polypeptide protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>AL831978-1|CAD89898.1|  303|Homo sapiens hypothetical protein
           protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>AJ006487-1|CAA07066.1|  539|Homo sapiens propionyl-CoA carboxylase
           protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 256 VAHRAFENDVDALCNLRDFFNYL 278


>AF217984-1|AAG17227.1|  302|Homo sapiens unknown protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 112 VAHRAFENDVDALCNLRDFFNYL 134


>AB209009-1|BAD92246.1|  556|Homo sapiens Propionyl Coenzyme A
           carboxylase, beta polypeptide variant protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 79  IIHLIFESDLDCVCDLSNFQDYL 147
           + H  FE+D+D +C+L +F +YL
Sbjct: 262 VAHRAFENDVDALCNLRDFFNYL 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,802,238
Number of Sequences: 237096
Number of extensions: 959532
Number of successful extensions: 1235
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)