BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13a24
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15906-1|CAA75867.1| 504|Homo sapiens XAGL protein protein. 179 6e-45
U83857-1|AAB86528.1| 528|Homo sapiens Aac11 protein. 179 6e-45
BT007093-1|AAP35756.1| 504|Homo sapiens apoptosis inhibitor 5 p... 179 6e-45
BC017709-1|AAH17709.1| 504|Homo sapiens apoptosis inhibitor 5 p... 179 6e-45
AY311389-1|AAQ76714.1| 504|Homo sapiens migration-inducing prot... 179 6e-45
AY265973-1|AAO89077.1| 504|Homo sapiens apoptosis inhibitor 5 p... 179 6e-45
AF229254-1|AAK00738.1| 504|Homo sapiens fibroblast growth facto... 179 6e-45
AF229253-1|AAK00737.1| 439|Homo sapiens fibroblast growth facto... 98 2e-20
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 31 2.4
U88726-1|AAB58578.1| 155|Homo sapiens symplekin protein. 31 4.2
BC030214-1|AAH30214.1| 533|Homo sapiens SYMPK protein protein. 31 4.2
AB210010-1|BAE06092.1| 1073|Homo sapiens SYMPK variant protein p... 31 4.2
AB209024-1|BAD92261.1| 686|Homo sapiens SYMPK protein variant p... 31 4.2
BC035183-1|AAH35183.1| 523|Homo sapiens LOC375748 protein protein. 30 5.5
AL389952-1|CAB97530.1| 365|Homo sapiens RAD26L hypothetical pro... 30 5.5
AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open readi... 30 5.5
AL161454-4|CAO03518.1| 365|Homo sapiens chromosome 9 open readi... 30 5.5
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 7.3
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 7.3
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 30 7.3
>Y15906-1|CAA75867.1| 504|Homo sapiens XAGL protein protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>U83857-1|AAB86528.1| 528|Homo sapiens Aac11 protein.
Length = 528
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 10 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 69
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 70 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 127
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 128 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 165
>BT007093-1|AAP35756.1| 504|Homo sapiens apoptosis inhibitor 5
protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>BC017709-1|AAH17709.1| 504|Homo sapiens apoptosis inhibitor 5
protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>AY311389-1|AAQ76714.1| 504|Homo sapiens migration-inducing protein
MIG8 protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>AY265973-1|AAO89077.1| 504|Homo sapiens apoptosis inhibitor 5
protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>AF229254-1|AAK00738.1| 504|Homo sapiens fibroblast growth factor
2-interacting factor protein.
Length = 504
Score = 179 bits (436), Expect = 6e-45
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = +2
Query: 116 IEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQA 295
+E+LY+NY ILA A +++ QH+ Y IL VKG KEKRLA+QFI KFF FP L++ A
Sbjct: 4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSA 63
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSL 475
I AQ DLCED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L
Sbjct: 64 INAQLDLCEDEDVSIRRQAIKELPQFAT--GENLPRVADILTQLLQTDDSAEFNLVNNAL 121
Query: 476 VTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
++I K D KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 122 LSIFKMDAKGTLGGLFSQILQGED------IVRERAIKFLSTKL 159
>AF229253-1|AAK00737.1| 439|Homo sapiens fibroblast growth factor
2-interacting factor protein.
Length = 439
Score = 97.9 bits (233), Expect = 2e-20
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 320 EDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVTNSLVTILKSDP 499
ED+DV+IR+QAIK+LP E+ R+ADIL QLLQ++DS E N+V N+L++I K D
Sbjct: 1 EDEDVSIRRQAIKELPQFATG--ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDA 58
Query: 500 KGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKI 607
KG L G+FSQI Q D IVRER IKFLS+K+
Sbjct: 59 KGTLGGLFSQILQGED------IVRERAIKFLSTKL 88
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 31.5 bits (68), Expect = 2.4
Identities = 28/110 (25%), Positives = 48/110 (43%)
Frame = +2
Query: 98 KMAGDNIEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFP 277
+ GD +K+ +L +K+ IS EKE ++ A ++ + E + +Q K
Sbjct: 516 RQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNH---- 571
Query: 278 TLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQL 427
TL EQ + L + KQA ++L +E K H + D + L
Sbjct: 572 TLQEQVTQLTEKLKNQSE--SHKQAQENLHDQVQEQKAHLRAAQDRVLSL 619
>U88726-1|AAB58578.1| 155|Homo sapiens symplekin protein.
Length = 155
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 203 AAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKE 382
AA+ +D + + Q N PTL + ++ D + +RK I + CK
Sbjct: 43 AALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR 102
Query: 383 HKEHTQRIADILAQLLQSEDSTEINVVTNSLVTI 484
E ++ L LL+ E+ +NVV +++T+
Sbjct: 103 DIELLLKLIANLNMLLRDEN---VNVVKKAILTM 133
>BC030214-1|AAH30214.1| 533|Homo sapiens SYMPK protein protein.
Length = 533
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 203 AAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKE 382
AA+ +D + + Q N PTL + ++ D + +RK I + CK
Sbjct: 43 AALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR 102
Query: 383 HKEHTQRIADILAQLLQSEDSTEINVVTNSLVTI 484
E ++ L LL+ E+ +NVV +++T+
Sbjct: 103 DIELLLKLIANLNMLLRDEN---VNVVKKAILTM 133
>AB210010-1|BAE06092.1| 1073|Homo sapiens SYMPK variant protein
protein.
Length = 1073
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 203 AAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKE 382
AA+ +D + + Q N PTL + ++ D + +RK I + CK
Sbjct: 58 AALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR 117
Query: 383 HKEHTQRIADILAQLLQSEDSTEINVVTNSLVTI 484
E ++ L LL+ E+ +NVV +++T+
Sbjct: 118 DIELLLKLIANLNMLLRDEN---VNVVKKAILTM 148
>AB209024-1|BAD92261.1| 686|Homo sapiens SYMPK protein variant
protein.
Length = 686
Score = 30.7 bits (66), Expect = 4.2
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 203 AAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKE 382
AA+ +D + + Q N PTL + ++ D + +RK I + CK
Sbjct: 56 AALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR 115
Query: 383 HKEHTQRIADILAQLLQSEDSTEINVVTNSLVTI 484
E ++ L LL+ E+ +NVV +++T+
Sbjct: 116 DIELLLKLIANLNMLLRDEN---VNVVKKAILTM 146
>BC035183-1|AAH35183.1| 523|Homo sapiens LOC375748 protein protein.
Length = 523
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/95 (17%), Positives = 47/95 (49%)
Frame = +2
Query: 107 GDNIEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLS 286
G+ ++ LY +Y +++ H + +L A S +++ L + + F+ FP
Sbjct: 260 GETVKTLYLSY---LTVLQKVANH----VALLQAASTSKQQETLIKRICDQVFSRFPDFV 312
Query: 287 EQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKE 391
+++ +A F+ D + + + ++ L C+++++
Sbjct: 313 QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRD 347
>AL389952-1|CAB97530.1| 365|Homo sapiens RAD26L hypothetical
protein, alternatively spliced product; similar to
(AF21731 protein.
Length = 365
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/95 (17%), Positives = 47/95 (49%)
Frame = +2
Query: 107 GDNIEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLS 286
G+ ++ LY +Y +++ H + +L A S +++ L + + F+ FP
Sbjct: 131 GETVKTLYLSY---LTVLQKVANH----VALLQAASTSKQQETLIKRICDQVFSRFPDFV 183
Query: 287 EQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKE 391
+++ +A F+ D + + + ++ L C+++++
Sbjct: 184 QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRD 218
>AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 712
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/95 (17%), Positives = 47/95 (49%)
Frame = +2
Query: 107 GDNIEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLS 286
G+ ++ LY +Y +++ H + +L A S +++ L + + F+ FP
Sbjct: 449 GETVKTLYLSY---LTVLQKVANH----VALLQAASTSKQQETLIKRICDQVFSRFPDFV 501
Query: 287 EQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKE 391
+++ +A F+ D + + + ++ L C+++++
Sbjct: 502 QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRD 536
>AL161454-4|CAO03518.1| 365|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 365
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/95 (17%), Positives = 47/95 (49%)
Frame = +2
Query: 107 GDNIEKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLS 286
G+ ++ LY +Y +++ H + +L A S +++ L + + F+ FP
Sbjct: 131 GETVKTLYLSY---LTVLQKVANH----VALLQAASTSKQQETLIKRICDQVFSRFPDFV 183
Query: 287 EQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKE 391
+++ +A F+ D + + + ++ L C+++++
Sbjct: 184 QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRD 218
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 29.9 bits (64), Expect = 7.3
Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +2
Query: 92 HKKMAGDNIEKLYKNYDI---LAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKF 262
H K+ +++++L KN + L + ++ Q + EI KG+ K+ S + KF
Sbjct: 2262 HSKV--NDLKELTKNLETPPDLQFIEADLMQKLEHAKEITEVAKGTLKDFTAQSTQVEKF 2319
Query: 263 FNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSED 442
N T + E+ + C ++ + +KD+ + + + + L L +
Sbjct: 2320 INDITTWFTKVEESLMN-CAQNETCEALKKVKDIQKELQSQQSNISSTQENLNSLCRKYH 2378
Query: 443 STEINVVTNSLVTILK 490
S E+ + ++ ++K
Sbjct: 2379 SAELESLGRAMTGLIK 2394
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 29.9 bits (64), Expect = 7.3
Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +2
Query: 92 HKKMAGDNIEKLYKNYDI---LAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKF 262
H K+ +++++L KN + L + ++ Q + EI KG+ K+ S + KF
Sbjct: 2255 HSKV--NDLKELTKNLETPPDLQFIEADLMQKLEHAKEITEVAKGTLKDFTAQSTQVEKF 2312
Query: 263 FNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSED 442
N T + E+ + C ++ + +KD+ + + + + L L +
Sbjct: 2313 INDITTWFTKVEESLMN-CAQNETCEALKKVKDIQKELQSQQSNISSTQENLNSLCRKYH 2371
Query: 443 STEINVVTNSLVTILK 490
S E+ + ++ ++K
Sbjct: 2372 SAELESLGRAMTGLIK 2387
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 77 TKVKGHKKMAGDNIEKLYKNYDILAAAKDEISQHEKEYLEILAA 208
T+ G + + NI + +D A +DEI+ ++ E ++ILA+
Sbjct: 2481 TQSNGSESSSSSNISTMLVTHDYTAVKEDEINVYQGEVVQILAS 2524
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,131,548
Number of Sequences: 237096
Number of extensions: 1585327
Number of successful extensions: 3385
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3369
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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