Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13a01
(451 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1125 + 31085106-31085714 33 0.14
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 32 0.24
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710... 31 0.43
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 31 0.57
12_01_0312 + 2349696-2350424 30 0.75
12_01_0311 + 2345492-2346325 30 0.75
03_06_0110 - 31727376-31727381,31727554-31727664,31728071-317281... 29 1.3
02_04_0435 + 22912993-22913456,22913847-22914012,22914096-229141... 29 1.3
02_04_0316 - 21978330-21979397 29 1.3
10_08_0957 + 21801347-21801710,21802319-21802649,21803052-218031... 29 2.3
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 28 3.0
03_05_0413 - 24002534-24002585,24003185-24003305,24003678-240038... 28 3.0
11_06_0064 + 19733643-19734056 28 4.0
09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219 28 4.0
10_03_0006 + 6929237-6929304,6929581-6929603,6929609-6929710,692... 27 5.3
06_02_0234 + 13319390-13320217 27 5.3
03_05_0880 - 28450248-28450458,28451911-28452013,28452135-284522... 27 5.3
11_01_0337 - 2519732-2521093 27 9.2
10_08_0475 + 18182412-18183270,18183384-18183880 27 9.2
07_03_1494 - 26976654-26976749,26976945-26977001,26977644-269777... 27 9.2
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 9.2
03_01_0053 + 457622-458191,458328-458393,458734-458978,459393-45... 27 9.2
02_05_0214 + 26823580-26823981 27 9.2
>04_04_1125 + 31085106-31085714
Length = 202
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 77 AAPVCKVPTPWLPSETSPTRSIYASLFRPVVCSTPAPVPS 196
A P PTPW P+ +P + A+ P TPAP PS
Sbjct: 68 ATPTPPTPTPWTPTPATPPPT-PATPATPTTPPTPAPAPS 106
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 31.9 bits (69), Expect = 0.24
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 50 CAVLLWYRGAAPVCKVPTPWLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAP 223
C +W G A +C P P S P +++S PVV ++ PS LAGS+ P
Sbjct: 123 CKYSVWC-GEADICPNPQPAYMSHPKPNPHVFSSPCSPVVFNS----PSNHLAGSTTP 175
>03_05_0756 +
27469002-27469107,27469200-27469369,27470210-27471001,
27471182-27471398,27471972-27472150,27472592-27472833,
27473662-27474052
Length = 698
Score = 31.1 bits (67), Expect = 0.43
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 107 WLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAP 223
W +ET + Y S P CS +P+P + +GS+ P
Sbjct: 581 WTGTETPESSGNYTSTLIPFSCSKNSPIPCESASGSNQP 619
>10_08_0762 -
20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 402 RQSHGRDEVSGLDIPVDA---DETNG 334
R S G+D VSGLD P DA DE NG
Sbjct: 892 RHSEGKDSVSGLDSPGDATCSDEDNG 917
>12_01_0312 + 2349696-2350424
Length = 242
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 372 GLDIPVDADETNGIRGVQTDCASLRDQGRVNYH---HQTITDPDETDILEAASG 220
G ++P+D D+ G RGV A++ + +H H D D+ + ++A+G
Sbjct: 131 GANMPLDLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAG 184
>12_01_0311 + 2345492-2346325
Length = 277
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 372 GLDIPVDADETNGIRGVQTDCASLRDQGRVNYH---HQTITDPDETDILEAASG 220
G ++P+D D+ G RGV A++ + +H H D D+ + ++A+G
Sbjct: 163 GANMPLDLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAG 216
>03_06_0110 -
31727376-31727381,31727554-31727664,31728071-31728133,
31729202-31729331,31729532-31729701,31729800-31729859,
31729941-31730018,31730108-31730197,31730275-31731118,
31731220-31731281,31731362-31731423,31731511-31731700
Length = 621
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 297 DQGRVNYHHQTITDPDETDILEAASGAEDPARVNEGTGAGVEQTTGRNSD 148
+ GR N + + T DE EAAS +E+P V + + VE + N D
Sbjct: 298 EAGRENRNGRENTAADENACPEAASSSEEPKEVMQESRIEVETSQADNCD 347
>02_04_0435 +
22912993-22913456,22913847-22914012,22914096-22914146,
22914353-22914578,22915275-22915963,22916055-22916408
Length = 649
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 297 HGD*RSPSAPLGYHWSRQHQQG 362
HG ++ APLG W+ QH QG
Sbjct: 330 HGSSKAGDAPLGAFWATQHAQG 351
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 106 LVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHS 204
LVALGD+ V RIA S SG + S IHS
Sbjct: 33 LVALGDRMAAVRRRIAASISGESGPLSSSDIHS 65
>10_08_0957 +
21801347-21801710,21802319-21802649,21803052-21803112,
21803266-21803334,21803631-21803846,21804012-21804071
Length = 366
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 243 PFHLGPLWSGGGN*PVPGHGD*RSPSAPLGYHWSRQHQQGC 365
P H P W G P P HG R+ + Y +SR +GC
Sbjct: 58 PQHQAPGW---GPPPPPAHGRKRAVICGISYKFSRHELKGC 95
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +3
Query: 60 CSGTGAQHRCAKYQRPGCP----RRQALPGPSTHRCFD 161
C GTGA C RPG RR+A P PS D
Sbjct: 56 CVGTGADVECYVDDRPGAEVGPIRREATPPPSPQDAVD 93
>03_05_0413 -
24002534-24002585,24003185-24003305,24003678-24003871,
24005359-24005651
Length = 219
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 374 VGWTSLLMLTRPMVSEGCRRTALVSVTRDG 285
VGW + + +++E C+ ALV V+ DG
Sbjct: 102 VGWPPVRSFRKNVLAEKCKAAALVKVSMDG 131
>11_06_0064 + 19733643-19734056
Length = 137
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 207 LGPQRR*LPPRCPFHLGPLWSGGGN*PVPGHG 302
+G RR LPP C L LW G GHG
Sbjct: 41 IGDTRRLLPPGCSCCLSSLWHGSST--AGGHG 70
>09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219
Length = 215
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 174 EQTTGRNSDA*MDLVGLVSEGNQGVGTLHT-GAAPLYQSKTAQ*YKR 37
+Q +G ++++ MDL G+ +EGN + + T G P Y Y R
Sbjct: 4 QQASGADAESGMDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSR 50
>10_03_0006 +
6929237-6929304,6929581-6929603,6929609-6929710,
6929752-6930207,6930237-6930538,6930628-6930717,
6931379-6931471
Length = 377
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 132 PGPSTHRCFDQWSAQHLRRFPHSLSLG 212
P PS H + W Q L RF H G
Sbjct: 39 PSPSLHHIYLAWQIQGLARFHHGSPFG 65
>06_02_0234 + 13319390-13320217
Length = 275
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 360 PVDADETNGIRGVQTDCASLRDQGRVNYHHQTITDPDETDILEAASGAEDPA 205
P+ A E IR + L + +H+ + +PD+ D+L A GA D A
Sbjct: 32 PLTATEITAIRAAVL-ASPLVPARPLFFHYVGLDEPDKPDVLSYAYGAADAA 82
>03_05_0880 -
28450248-28450458,28451911-28452013,28452135-28452280,
28452629-28452801,28453267-28453539
Length = 301
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 290 PWSRRLAQSVCTPRIPLVSSASTGMSNPLTS 382
PWS A+ +C V +A GM PLT+
Sbjct: 9 PWSGAGAEPICGDAAAAVVAARKGMETPLTA 39
>11_01_0337 - 2519732-2521093
Length = 453
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 341 VSSASTGMSNPLTSSLPWLCLPARTY 418
V++ + S L SLPWL L RTY
Sbjct: 96 VTTGPSSSSLQLPPSLPWLALDRRTY 121
>10_08_0475 + 18182412-18183270,18183384-18183880
Length = 451
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 391 RER*SQWVGHPC*C*RDQWYPRGADG 314
R+ S W G PC R +WY DG
Sbjct: 36 RDLHSNWTGPPCHGGRSRWYGVACDG 61
>07_03_1494 -
26976654-26976749,26976945-26977001,26977644-26977712,
26977892-26977993,26978081-26978149,26979205-26979297,
26979908-26979959,26980549-26980635,26980720-26980802,
26980909-26981040,26981132-26981205,26981280-26981341,
26981428-26981513
Length = 353
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 44 YYCAVLLWYRGAAPVCKVPTPWLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAP 223
Y ++ YRG +PV V L + + TRS+ + + AP PS T S P
Sbjct: 56 YNAGGVIGYRGRSPVYTVKVLELLFQINHTRSMSTAAQAEPPSLSKAPTPSQT--SSKVP 113
Query: 224 LAA 232
L A
Sbjct: 114 LGA 116
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 314 SVCTPRIPLVSSASTGMSNPLTSSLP 391
SV TP IP+VS ST +S + + P
Sbjct: 1877 SVATPTIPVVSEGSTKISEVVVADKP 1902
>03_01_0053 +
457622-458191,458328-458393,458734-458978,459393-459861
Length = 449
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 290 PWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWL 397
PWS RL +SV IP++ + + P S L WL
Sbjct: 338 PWSPRLVESVLLGCIPVIIADDIRL--PFPSVLQWL 371
>02_05_0214 + 26823580-26823981
Length = 133
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 74 GAAPVCKVPTPWLPSETSPT 133
G +P C PTP P+ ++PT
Sbjct: 24 GGSPSCPTPTPSTPTPSTPT 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,367
Number of Sequences: 37544
Number of extensions: 402761
Number of successful extensions: 1446
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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