Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12p13
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens ... 37 0.057
AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein ... 37 0.076
AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein ... 37 0.076
AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein ... 37 0.076
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 36 0.10
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 36 0.10
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 36 0.10
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 36 0.10
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 36 0.10
U80918-1|AAD00451.1| 930|Homo sapiens transcription factor prot... 35 0.23
U80917-1|AAD00450.1| 825|Homo sapiens transcription factor prot... 35 0.23
U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein. 35 0.23
U08015-1|AAA19601.1| 716|Homo sapiens NF-ATc protein. 35 0.23
BC112243-1|AAI12244.1| 716|Homo sapiens nuclear factor of activ... 35 0.23
BC104753-1|AAI04754.1| 716|Homo sapiens nuclear factor of activ... 35 0.23
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 34 0.40
U84581-1|AAB41794.1| 121|Homo sapiens zonula occludens 2 protei... 34 0.53
BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein ... 33 0.93
AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein ... 33 0.93
AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ... 33 0.93
AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ... 33 0.93
BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for IM... 32 1.6
AY675092-1|AAV49502.1| 164|Homo sapiens voltage-dependent calci... 32 1.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 1.6
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 32 1.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 1.6
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 32 2.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 2.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 2.2
AB028964-1|BAA82993.2| 642|Homo sapiens KIAA1041 protein protein. 31 3.8
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 31 5.0
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 31 5.0
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 31 5.0
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 31 5.0
U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline transp... 30 6.6
BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X dom... 30 6.6
AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK126103-1|BAC86441.1| 1078|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK023056-1|BAB14381.1| 852|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK130703-1|BAC85407.1| 174|Homo sapiens protein ( Homo sapiens ... 30 8.7
>AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ16652 fis, clone TESTI4036767. ).
Length = 325
Score = 37.1 bits (82), Expect = 0.057
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRH-SPS-TPHHKRTQEPSPHGSPHR 562
R R+ DP R QR P+ HR +RGPRH +P +P H+ Q H +P R
Sbjct: 85 RDPTHRAPQRDPTHRAPQRDPT-HRAPQRGPRHRAPQRSPRHRAPQRDPTHRAPQR 139
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRH-SPS-TPHHKRTQEPSPHGSPHR 562
P R QR P+ HR +RGPRH +P P H+ Q H +P R
Sbjct: 123 PRHRAPQRDPT-HRAPQRGPRHRAPQRDPTHRAPQRGPRHRAPQR 166
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRH-SPST-PHHKRTQEPSPHGSPHR 562
P R QR P RHR +RGPRH +P P H+ Q +P R
Sbjct: 168 PTHRAPQRGP-RHRAPQRGPRHRAPQRGPTHRAPQRDPGWRAPQR 211
>AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1043
Score = 36.7 bits (81), Expect = 0.076
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 398 LRSSISRSCVP--DPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYW 571
L SSI+RS P +AQ+ P + + + + P TP H ++ P P +P R Y
Sbjct: 945 LVSSITRSSEPVQHEEIEIAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQ 1004
Query: 572 PTQHSW 589
T+ S+
Sbjct: 1005 DTRGSY 1010
>AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein ZO-2
isoform C protein.
Length = 1020
Score = 36.7 bits (81), Expect = 0.076
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 398 LRSSISRSCVP--DPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYW 571
L SSI+RS P +AQ+ P + + + + P TP H ++ P P +P R Y
Sbjct: 922 LVSSITRSSEPVQHEEIEIAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQ 981
Query: 572 PTQHSW 589
T+ S+
Sbjct: 982 DTRGSY 987
>AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein ZO-2
isoform A protein.
Length = 1043
Score = 36.7 bits (81), Expect = 0.076
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 398 LRSSISRSCVP--DPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYW 571
L SSI+RS P +AQ+ P + + + + P TP H ++ P P +P R Y
Sbjct: 945 LVSSITRSSEPVQHEEIEIAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQ 1004
Query: 572 PTQHSW 589
T+ S+
Sbjct: 1005 DTRGSY 1010
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 36.3 bits (80), Expect = 0.10
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
R S SRS P P R + +P R R SPS P +R + PSP P R PT
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRR------RRSPSPPPTRRRRSPSPAPPPRRRRTPT 574
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 36.3 bits (80), Expect = 0.10
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
R S SRS P P R + +P R R SPS P +R + PSP P R PT
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRR------RRSPSPPPTRRRRSPSPAPPPRRRRTPT 574
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 36.3 bits (80), Expect = 0.10
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
R S SRS P P R + +P R R SPS P +R + PSP P R PT
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRR------RRSPSPPPTRRRRSPSPAPPPRRRRTPT 574
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 36.3 bits (80), Expect = 0.10
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
R S SRS P P R + +P R R SPS P +R + PSP P R PT
Sbjct: 520 RHSPSRSASPSPRKRQKETSPRGRR------RRSPSPPPTRRRRSPSPAPPPRRRRTPT 572
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 36.3 bits (80), Expect = 0.10
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
R S SRS P P R + +P R R SPS P +R + PSP P R PT
Sbjct: 520 RHSPSRSASPSPRKRQKETSPRGRR------RRSPSPPPTRRRRSPSPAPPPRRRRTPT 572
>U80918-1|AAD00451.1| 930|Homo sapiens transcription factor
protein.
Length = 930
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 240 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 287
>U80917-1|AAD00450.1| 825|Homo sapiens transcription factor
protein.
Length = 825
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 253 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 300
>U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein.
Length = 812
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 240 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 287
>U08015-1|AAA19601.1| 716|Homo sapiens NF-ATc protein.
Length = 716
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 253 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 300
>BC112243-1|AAI12244.1| 716|Homo sapiens nuclear factor of
activated T-cells, cytosolic component 1, isoform A
protein.
Length = 716
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 253 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 300
>BC104753-1|AAI04754.1| 716|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic, calcineurin-dependent 1
protein.
Length = 716
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 437 GARLAQRA-PSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
GAR ++ A P R R P +PHH T PSPHGSP + T SW
Sbjct: 253 GARSSRPASPCNKRKYSLNGRQPPYSPHHSPT--PSPHGSPRVSV--TDDSW 300
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 34.3 bits (75), Expect = 0.40
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 398 LRSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHH----KRTQEPSPHGSPHR 562
LR+ S + P R P R R+ PR SP TP +R SP GSPHR
Sbjct: 61 LRTLPRASLMRTPTRASLMRTPPRASPTRKPPRASPRTPSRASPTRRLPRASPMGSPHR 119
>U84581-1|AAB41794.1| 121|Homo sapiens zonula occludens 2 protein
protein.
Length = 121
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 446 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
+AQ+ P + + + + P TP H ++ P P +P R Y T+ S+
Sbjct: 64 IAQKHPDIYAVPIKTHKPDPGTPQHTNSRPPEPQKAPSRPYQDTRRSF 111
>BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 33.1 bits (72), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 446 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
+AQ+ P + + + + P TP H ++ P P +P R Y T+ S+
Sbjct: 1110 IAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQDTRGSY 1157
>AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 33.1 bits (72), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 446 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
+AQ+ P + + + + P TP H ++ P P +P R Y T+ S+
Sbjct: 1110 IAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQDTRGSY 1157
>AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ZO-2
isoform C protein.
Length = 1167
Score = 33.1 bits (72), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 446 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
+AQ+ P + + + + P TP H ++ P P +P R Y T+ S+
Sbjct: 1087 IAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQDTRGSY 1134
>AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ZO-2
isoform A protein.
Length = 1190
Score = 33.1 bits (72), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 446 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSW 589
+AQ+ P + + + + P TP H ++ P P +P R Y T+ S+
Sbjct: 1110 IAQKHPDIYAVPIKTHKPDPGTPQHTSSRPPEPQKAPSRPYQDTRGSY 1157
>BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for
IMAGE:3875076) protein.
Length = 198
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 428 PDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRT-QEPSPHGSPHRT 565
P P R Q++ S R RRG R +P HKR + PSP HR+
Sbjct: 149 PQPSPR-DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRS 194
>AY675092-1|AAV49502.1| 164|Homo sapiens voltage-dependent calcium
channel beta 2g subunit protein.
Length = 164
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 416 RSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTY-WPTQHSW 589
R C P A A+ PS + + R S S PHH S S T+ TQ SW
Sbjct: 9 RQCAPIRSASQAEEEPSVEPVKKSQHRSSSSAPHHNHRSGTSRGLSRQETFDSETQESW 67
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 428 PDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRT-QEPSPHGSPHRT 565
P P R Q++ S R RRG R +P HKR + PSP HR+
Sbjct: 2703 PQPSPR-DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRS 2748
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
Length = 1275
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 428 PDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRT-QEPSPHGSPHRT 565
P P R Q++ S R RRG R +P HKR + PSP HR+
Sbjct: 1226 PQPSPR-DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRS 1271
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 428 PDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRT-QEPSPHGSPHRT 565
P P R Q++ S R RRG R +P HKR + PSP HR+
Sbjct: 2751 PQPSPR-DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRS 2796
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 31.9 bits (69), Expect = 2.2
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +2
Query: 413 SRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHR-TY-----WP 574
SRS P R R RHR + PR P H+R P P P R +Y WP
Sbjct: 25 SRSQAQTP-PRSVPRLRPRHRH-PQDPRSPGPAPRHRRPPRPDPRAPPARASYRRFRTWP 82
Query: 575 TQHSWQ 592
+ SW+
Sbjct: 83 SATSWE 88
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.2
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLR-RGP-------RHSPSTPHHKRTQEPSPHGSP 556
R S SRS P P R + +P R + P R SPS P +R + PSP P
Sbjct: 517 RHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPP 576
Query: 557 HRTYWPT 577
R PT
Sbjct: 577 RRRRTPT 583
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.2
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +2
Query: 401 RSSISRSCVPDPGARLAQRAPSRHRLLR-RGP-------RHSPSTPHHKRTQEPSPHGSP 556
R S SRS P P R + +P R + P R SPS P +R + PSP P
Sbjct: 517 RHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPP 576
Query: 557 HRTYWPT 577
R PT
Sbjct: 577 RRRRTPT 583
>AB028964-1|BAA82993.2| 642|Homo sapiens KIAA1041 protein protein.
Length = 642
Score = 31.1 bits (67), Expect = 3.8
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 491 PRHSPSTPHHKRTQEPSPHGSPHRTYWPTQHSWQL*PH 604
P+ SP PH P SPH P QHS PH
Sbjct: 397 PQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPH 434
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 407 SISRSCVPDPGARLAQRAPSR-HRLLR 484
++ ++CVP PG R AQ APS+ H+ R
Sbjct: 493 ALDQACVPSPGRRQAQAAPSQGHKSFR 519
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 407 SISRSCVPDPGARLAQRAPSR-HRLLR 484
++ ++CVP PG R AQ APS+ H+ R
Sbjct: 65 ALDQACVPSPGRRQAQAAPSQGHKSFR 91
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 407 SISRSCVPDPGARLAQRAPSR-HRLLR 484
++ ++CVP PG R AQ APS+ H+ R
Sbjct: 363 ALDQACVPSPGRRQAQAAPSQGHKSFR 389
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 407 SISRSCVPDPGARLAQRAPSR-HRLLR 484
++ ++CVP PG R AQ APS+ H+ R
Sbjct: 495 ALDQACVPSPGRRQAQAAPSQGHKSFR 521
>U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline
transporter protein.
Length = 732
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 455 RAPSRHRLLRRGPRHSPSTPHHKRTQ-EPSPHGSPHRTYWP 574
RAP LRR PR SP+ H Q +P PH T WP
Sbjct: 170 RAPRLLSPLRRAPRGSPAPHRHASLQTNEAPRELPHCT-WP 209
>BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X domain
containing 2 protein.
Length = 1363
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
PGA ++ S H P HS TP H T P+P +P T PT
Sbjct: 824 PGAPMSSHTSSTHFY---HPIHSNGTPIHTPTPTPTPTPTPTPTPTPT 868
>AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens
cDNA FLJ46165 fis, clone TESTI4002868, weakly similar
to DNA-binding protein RFX5. ).
Length = 1281
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
PGA ++ S H P HS TP H T P+P +P T PT
Sbjct: 824 PGAPMSSHTSSTHFY---HPIHSNGTPIHTPTPTPTPTPTPTPTPTPT 868
>AK126103-1|BAC86441.1| 1078|Homo sapiens protein ( Homo sapiens
cDNA FLJ44115 fis, clone TESTI4046819. ).
Length = 1078
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
PGA ++ S H P HS TP H T P+P +P T PT
Sbjct: 539 PGAPMSSHTSSTHFY---HPIHSNGTPIHTPTPTPTPTPTPTPTPTPT 583
>AK023056-1|BAB14381.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ12994 fis, clone NT2RP3000207, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 852
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 434 PGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHRTYWPT 577
PGA ++ S H P HS TP H T P+P +P T PT
Sbjct: 313 PGAPMSSHTSSTHFY---HPIHSNGTPIHTPTPTPTPTPTPTPTPTPT 357
>AK130703-1|BAC85407.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ27193 fis, clone SYN02554. ).
Length = 174
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 337 WRNFASLR-TLKRPISQTVVKVSCSGYIRNLPP*HASTTSSPDAILKVPFV 188
W F + T P++++ + SC Y+RN+ H++ +S P A+ + P +
Sbjct: 67 WEQFLTPSLTSSEPVTKSC-RQSCQFYLRNISSVHSTVSSRPTALSRSPLL 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,818,450
Number of Sequences: 237096
Number of extensions: 2630500
Number of successful extensions: 11479
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 10833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11455
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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