Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12o13
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.0  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   5.3  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   5.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   5.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.3  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   7.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.0  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.3  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 117 VENFKINLYLNLK 79
           VENFK  +YL LK
Sbjct: 478 VENFKGGMYLRLK 490


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 117 VENFKINLYLNLK 79
           VENFK  +YL LK
Sbjct: 478 VENFKGGMYLRLK 490


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VPI+
Sbjct: 325 YNIINIEQIPVPVPVPIY 342


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VPI+
Sbjct: 336 YNIINIEQIPVPVPVPIY 353


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VPI+
Sbjct: 354 YNIINIEQIPVPVPVPIY 371


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VPI+
Sbjct: 356 YNIINIEQIPVPVPVPIY 373


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 166 VTKIKNKNNSRRFEFLGRK 110
           +TK+ N    +RFE   RK
Sbjct: 99  LTKLNNAIEEKRFELTNRK 117


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VP++
Sbjct: 114 YNIINIEQIPVPVPVPVY 131


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 12  YDIISINLIG*PIVVPIF 65
           Y+II+I  I  P+ VP++
Sbjct: 114 YNIINIEQIPVPVPVPVY 131


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 258 SYYEFIKIVTLVS 296
           SYY +I ++TLV+
Sbjct: 639 SYYSYIGVLTLVA 651


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,620
Number of Sequences: 438
Number of extensions: 2539
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)