Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12m22
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containin...    51   3e-06
AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK...    32   1.4  
BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interactin...    31   2.5  
BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interactin...    31   2.5  

>BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containing
           protein.
          Length = 292

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
 Frame = +2

Query: 308 PGAVKFGNFINYYSFHNVAERINNLHP----NMFPTLTED--IYCLDIGCNTGDLTRELY 469
           PGA  FGNF +Y  FH   +R+  L P     +FP   E+  I  LD+GCN+GDL+  LY
Sbjct: 26  PGAAPFGNFPHYSRFHPPEQRLRLLPPELLRQLFPESPENGPILGLDVGCNSGDLSVALY 85

Query: 470 K 472
           K
Sbjct: 86  K 86


>AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK
            protein.
          Length = 1165

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
 Frame = -3

Query: 618  HDHFFP*HLRLCIQCFVRC*TLEHDL*VLSQCQRPICATCIEDKGFFNSLYNSLVRSPVL 439
            +D + P H+R      ++C    H + +L          C ED+G + + Y  + +  VL
Sbjct: 1023 YDIYLPTHVRKNPHSMIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVL 1082

Query: 438  Q----PMSRQYISS 409
            Q    P S  YI S
Sbjct: 1083 QWGEMPTSVAYIRS 1096


>BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +2

Query: 320 KFGNFINYYSFHNVA---ERINNLHPNMFPTLTEDIYCLDIGCNTGDLT 457
           ++GN+  YY + N +    R+  L P  F     D+  LD+GCN G LT
Sbjct: 414 QYGNYCKYYGYRNPSCEDGRLRVLKPEWFRG--RDV--LDLGCNVGHLT 458


>BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +2

Query: 320 KFGNFINYYSFHNVA---ERINNLHPNMFPTLTEDIYCLDIGCNTGDLT 457
           ++GN+  YY + N +    R+  L P  F     D+  LD+GCN G LT
Sbjct: 414 QYGNYCKYYGYRNPSCEDGRLRVLKPEWFRG--RDV--LDLGCNVGHLT 458


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,815,442
Number of Sequences: 237096
Number of extensions: 1888485
Number of successful extensions: 3065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3062
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)