Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12m09
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    27   0.17 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    27   0.17 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   8.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +1

Query: 136 IMEIENIEDTVTVKLLFFAKSKELSGVRETSITLPRKLGYQRLLNIICDKYNLNSIKKNI 315
           IME+ NIE T  VK++++      S  RE  + LP          ++C  Y    + +N+
Sbjct: 283 IMELHNIEGTHYVKIVYYLGIP--SEARE--LQLPG-------CEVLCPLYKYLQLIENV 331

Query: 316 LLAKNEVVCE 345
           + +  E++C+
Sbjct: 332 IPSNEELICD 341


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +1

Query: 136 IMEIENIEDTVTVKLLFFAKSKELSGVRETSITLPRKLGYQRLLNIICDKYNLNSIKKNI 315
           IME+ NIE T  VK++++      S  RE  + LP          ++C  Y    + +N+
Sbjct: 298 IMELHNIEGTHYVKIVYYLGIP--SEARE--LQLPG-------CEVLCPLYKYLQLIENV 346

Query: 316 LLAKNEVVCE 345
           + +  E++C+
Sbjct: 347 IPSNEELICD 356


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/74 (18%), Positives = 35/74 (47%)
 Frame = +1

Query: 415 IVFHRMDHIKLTVDRLSVEEISELVTDDSCGAISLFIGTTRDNFEGKKVLRLEYEAYESM 594
           I+F     + L +   S E I+++  D++C  +   +  T+D ++  ++ RL+      +
Sbjct: 7   IMFIHSIFLILIIFIYSNETIAQVTDDENCETLQSEVHITKDEYD--EIGRLKRTCSGDI 64

Query: 595 AIKAIKTICDDVXQ 636
           ++   +  C+   Q
Sbjct: 65  SVTKCEGFCNSQVQ 78


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/74 (18%), Positives = 35/74 (47%)
 Frame = +1

Query: 415 IVFHRMDHIKLTVDRLSVEEISELVTDDSCGAISLFIGTTRDNFEGKKVLRLEYEAYESM 594
           I+F     + L +   S E I+++  D++C  +   +  T+D ++  ++ RL+      +
Sbjct: 7   IMFIHSIFLILIIFIYSNETIAQVTDDENCETLQSEVHITKDEYD--EIGRLKRTCSGDI 64

Query: 595 AIKAIKTICDDVXQ 636
           ++   +  C+   Q
Sbjct: 65  SVTKCEGFCNSQVQ 78


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 430 MDHIKLTVDRLSVEEISELVTDD 498
           +  IK+  D+L  EE++  VT+D
Sbjct: 496 LKEIKIITDQLKSEELNAKVTND 518


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 223 TSITLPRKLGYQRLLNIICDK 285
           T +T+PR  G    LN+I +K
Sbjct: 80  TFVTVPRYKGVPSSLNVISEK 100


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 700 PLDTERCP 677
           P+DT+RCP
Sbjct: 138 PMDTQRCP 145


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 298 SIKKNILLAKNEVVCEDTVDIEINEQ 375
           +I +NI  AKN ++     D+ INE+
Sbjct: 416 NIAQNIDHAKNTIIDYRNNDLSINEE 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,060
Number of Sequences: 438
Number of extensions: 3617
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)