Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12l15
         (260 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   1.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   4.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   5.8  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 56  YPRHFICCYTREISKSISSFFLFTHKYTYLSNF 154
           +PRH +C +   +   +S   +      Y+S F
Sbjct: 172 HPRHRLCVFVAGVVFIVSGLLMLVGMVMYISVF 204


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +1

Query: 16 LRIDACLLLRCRDLSPSFYMLLHSRN 93
          L +  CL + C+D++ + +    S+N
Sbjct: 5  LLLIVCLSIACQDVTSAIHQRKSSKN 30


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 260 FFF*KPITLIYIY 222
           FFF   ITLI++Y
Sbjct: 7   FFFILVITLIFLY 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,062
Number of Sequences: 438
Number of extensions: 747
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)