Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12l06
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase... 234 2e-61
AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens ... 234 2e-61
AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung ca... 234 2e-61
BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase... 76 1e-13
BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein. 76 1e-13
U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein. 75 2e-13
BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein. 66 1e-10
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 59 1e-08
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 59 1e-08
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 59 1e-08
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 59 1e-08
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 53 8e-07
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 52 2e-06
BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein. 42 0.002
AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein. 35 0.22
BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein. 34 0.38
>BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase
2-like, SMM1 homolog (S. cerevisiae) protein.
Length = 493
Score = 234 bits (573), Expect = 2e-61
Identities = 115/181 (63%), Positives = 140/181 (77%)
Frame = +2
Query: 101 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 280
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 281 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 460
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHG 640
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++ +GI AIAVHG
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHG 184
Query: 641 R 643
R
Sbjct: 185 R 185
>AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ20399 fis, clone KAT00581. ).
Length = 493
Score = 234 bits (573), Expect = 2e-61
Identities = 115/181 (63%), Positives = 140/181 (77%)
Frame = +2
Query: 101 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 280
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 281 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 460
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHG 640
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++ +GI AIAVHG
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHG 184
Query: 641 R 643
R
Sbjct: 185 R 185
>AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung
cancer 8 protein.
Length = 493
Score = 234 bits (573), Expect = 2e-61
Identities = 115/181 (63%), Positives = 140/181 (77%)
Frame = +2
Query: 101 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 280
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 281 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 460
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHG 640
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++ +GI AIAVHG
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHG 184
Query: 641 R 643
R
Sbjct: 185 R 185
>BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase
1-like (S. cerevisiae) protein.
Length = 473
Score = 75.8 bits (178), Expect = 1e-13
Identities = 50/173 (28%), Positives = 85/173 (49%)
Frame = +2
Query: 128 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 307
++APMV L RLL+ ++GA + YT L F+R +Y + +
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRD----------ANYRKE---NLY 66
Query: 308 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 487
C E+ + +++Q D ++ A L + AID+N+GCP+ + +G G L +
Sbjct: 67 CEVCPED-RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE 125
Query: 488 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRT 646
D +++ + LS+PVTCKIR+ + T+ L +G + + VHGRT
Sbjct: 126 WDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRT 178
>BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein.
Length = 473
Score = 75.8 bits (178), Expect = 1e-13
Identities = 50/173 (28%), Positives = 85/173 (49%)
Frame = +2
Query: 128 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 307
++APMV L RLL+ ++GA + YT L F+R +Y + +
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRD----------ANYRKE---NLY 66
Query: 308 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 487
C E+ + +++Q D ++ A L + AID+N+GCP+ + +G G L +
Sbjct: 67 CEVCPED-RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE 125
Query: 488 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRT 646
D +++ + LS+PVTCKIR+ + T+ L +G + + VHGRT
Sbjct: 126 WDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRT 178
>U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein.
Length = 307
Score = 75.4 bits (177), Expect = 2e-13
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Frame = +2
Query: 98 PINMNYENKII--LAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNT 271
PI M + +++ APMVR L R L KY D+ YT ++ F++S + + T
Sbjct: 8 PIEMFHSGQLVKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTT 67
Query: 272 VDYVDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFS 451
+Q D C +++Q D A++V IDIN GCP+ ++
Sbjct: 68 ----NQGD-------CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWA 111
Query: 452 IKGGMGVALLSKPDKAYQILKTLVDNLSIP---VTCKIRILKTPEATLELVNKLVSSGIK 622
+ G G L++KP+ ++K + + + P V+ KIRI + T++L K ++G+
Sbjct: 112 MAEGYGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRINDDLKRTVDLCQKAEATGVS 171
Query: 623 AIAVHGRT 646
I VHGRT
Sbjct: 172 WITVHGRT 179
>BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein.
Length = 406
Score = 66.1 bits (154), Expect = 1e-10
Identities = 33/107 (30%), Positives = 57/107 (53%)
Frame = +2
Query: 326 EKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQ 505
E + +++Q D ++ A L + AID+N+GCP+ + +G G L + D +
Sbjct: 5 EDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQR 64
Query: 506 ILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRT 646
++ + LS+PVTCKIR+ + T+ L +G + + VHGRT
Sbjct: 65 MILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRT 111
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 59.3 bits (137), Expect = 1e-08
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Frame = +2
Query: 107 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 286
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 301 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 355
Query: 287 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 460
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 356 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 404
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR--ILKTPEATLELVNKLVSSGIKAIAV 634
G G AL+++ K QI++ + L +P+T KIR + + L+ +L G+ + +
Sbjct: 405 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTL 464
Query: 635 HGRT 646
HGR+
Sbjct: 465 HGRS 468
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 59.3 bits (137), Expect = 1e-08
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Frame = +2
Query: 107 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 286
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 264 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 318
Query: 287 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 460
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 319 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 367
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR--ILKTPEATLELVNKLVSSGIKAIAV 634
G G AL+++ K QI++ + L +P+T KIR + + L+ +L G+ + +
Sbjct: 368 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTL 427
Query: 635 HGRT 646
HGR+
Sbjct: 428 HGRS 431
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 59.3 bits (137), Expect = 1e-08
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Frame = +2
Query: 107 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 286
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 59 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 113
Query: 287 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 460
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 114 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 162
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR--ILKTPEATLELVNKLVSSGIKAIAV 634
G G AL+++ K QI++ + L +P+T KIR + + L+ +L G+ + +
Sbjct: 163 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTL 222
Query: 635 HGRT 646
HGR+
Sbjct: 223 HGRS 226
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 59.3 bits (137), Expect = 1e-08
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Frame = +2
Query: 107 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 286
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 301 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 355
Query: 287 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 460
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 356 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 404
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR--ILKTPEATLELVNKLVSSGIKAIAV 634
G G AL+++ K QI++ + L +P+T KIR + + L+ +L G+ + +
Sbjct: 405 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTL 464
Query: 635 HGRT 646
HGR+
Sbjct: 465 HGRS 468
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 53.2 bits (122), Expect = 8e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +2
Query: 107 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 286
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 284 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 338
Query: 287 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 460
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 339 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 387
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 559
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 388 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 420
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 51.6 bits (118), Expect = 2e-06
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +2
Query: 404 DVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR--ILKTPE 577
+V +DIN+GCP + K G G AL+++ K QI++ + L +P+T KIR + +
Sbjct: 10 EVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVN 69
Query: 578 ATLELVNKLVSSGIKAIAVHGRT 646
L+ +L G+ + +HGR+
Sbjct: 70 LAHRLLPELRDWGVALVTLHGRS 92
>BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein.
Length = 196
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 461 GMGVALLSKPDKAYQILKTLVDNLSIP---VTCKIRILKTPEATLELVNKLVSSGIKAIA 631
G G L++KP+ ++K + + + P V+ KIRI + T++L K ++G+ I
Sbjct: 4 GYGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWIT 63
Query: 632 VHGRT 646
VHGRT
Sbjct: 64 VHGRT 68
>AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein.
Length = 540
Score = 35.1 bits (77), Expect = 0.22
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Frame = +2
Query: 227 KFLRSKRRFNDILNTVDYVDQTDGTIVFRTCE--EEK------KKVVLQLGTCDEARALK 382
K LR + F D+ + +D +D + ++TCE EE K V L+ DE A
Sbjct: 26 KLLRQLQEFTDLGHRLDCLDLKGEKLDYKTCEALEEVFKRLQFKVVDLEQTNLDEDGASA 85
Query: 383 VAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKT----LVDNLSIPVTC 550
+ ++E+ +A +N+ K +G A + + Q L L+D+ S P
Sbjct: 86 LFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDH-SAPFVA 144
Query: 551 KIRILKTPEATLELVNKLVS 610
+ +++ A L L N +S
Sbjct: 145 RALRIRSSLAVLHLENASLS 164
>BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 533 SIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRT 646
++ VTCKIR+ + T+ L +G + + VHGRT
Sbjct: 10 TLSVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRT 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,939,551
Number of Sequences: 237096
Number of extensions: 1862890
Number of successful extensions: 2866
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2862
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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