Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12k14
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017425-1|AAH17425.1| 322|Homo sapiens ribokinase protein. 142 8e-34
AJ404857-1|CAC12877.1| 322|Homo sapiens ribokinase protein. 142 8e-34
BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein. 30 8.9
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 30 8.9
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein. 30 8.9
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein. 30 8.9
>BC017425-1|AAH17425.1| 322|Homo sapiens ribokinase protein.
Length = 322
Score = 142 bits (345), Expect = 8e-34
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Frame = +1
Query: 64 LVVLGSCSVDFTTYAPKLPKSGETLHXXXXXXXXXXXXANQCVAAAKLGGNAYMICRVGD 243
+VV+GSC D + +LPK+GET+H ANQCV AA+LG M+C+VG
Sbjct: 18 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGK 77
Query: 244 DQWGKKYKDHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVE 423
D +G Y ++LK ++ + + TK+ TG A I+V G+N IVIV GAN L+ +D+
Sbjct: 78 DSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLR 137
Query: 424 ESIELIKNADVLIGQLETPFETTYTAFKL--NNGIK-LLNAAPALTDI-RKILPFCTILC 591
+ +I A V++ QLE T+ A + +G+K L N APA+ D+ + + C
Sbjct: 138 AAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFC 197
Query: 592 VNELEASVLTNVDV-TISNASMAAKKLL 672
NE EA +LT + V + ++A AA LL
Sbjct: 198 CNESEAEILTGLTVGSAADAGEAALVLL 225
>AJ404857-1|CAC12877.1| 322|Homo sapiens ribokinase protein.
Length = 322
Score = 142 bits (345), Expect = 8e-34
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Frame = +1
Query: 64 LVVLGSCSVDFTTYAPKLPKSGETLHXXXXXXXXXXXXANQCVAAAKLGGNAYMICRVGD 243
+VV+GSC D + +LPK+GET+H ANQCV AA+LG M+C+VG
Sbjct: 18 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGK 77
Query: 244 DQWGKKYKDHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVE 423
D +G Y ++LK ++ + + TK+ TG A I+V G+N IVIV GAN L+ +D+
Sbjct: 78 DSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLR 137
Query: 424 ESIELIKNADVLIGQLETPFETTYTAFKL--NNGIK-LLNAAPALTDI-RKILPFCTILC 591
+ +I A V++ QLE T+ A + +G+K L N APA+ D+ + + C
Sbjct: 138 AAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFC 197
Query: 592 VNELEASVLTNVDV-TISNASMAAKKLL 672
NE EA +LT + V + ++A AA LL
Sbjct: 198 CNESEAEILTGLTVGSAADAGEAALVLL 225
>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 8.9
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI +V + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQIGVVERG----AFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein.
Length = 798
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 47 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 100
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 101 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 160
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 161 RALRGLEVLTLNN 173
>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 409
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 47 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 100
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 101 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 160
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 161 RALRGLEVLTLNN 173
>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
Length = 1534
Score = 29.9 bits (64), Expect = 8.9
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLRLDKNQISCIEEGAF 177
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
Length = 1618
Score = 29.9 bits (64), Expect = 8.9
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 447
+ L+ G N++ +H KN+ G+ Q+ V + ENQI +V + D++E L N
Sbjct: 148 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQIGVVERG----AFDDMKELERLRLN 201
Query: 448 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 609
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 202 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 261
Query: 610 SVLTNVDV-TISN 645
L ++V T++N
Sbjct: 262 RALRGLEVLTLNN 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,355,370
Number of Sequences: 237096
Number of extensions: 2034566
Number of successful extensions: 3308
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3302
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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