Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12k14
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.7  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   4.8  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   6.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.3  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    22   6.3  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        22   6.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   6.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.3  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 448 ADVLIGQLETPFETTYTAFKL 510
           AD+++G    PF  T+  FK+
Sbjct: 110 ADLMVGLAVLPFSATWEVFKV 130


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +1

Query: 418 VEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFCTI 585
           V   +EL +N  +   +  +PF+ T   FKL    +         D RK+   CT+
Sbjct: 37  VSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFE-----EETVDGRKVKSVCTL 87


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 185 WFAPFPPKLVVNFVP----CKVSPDLGSFGAYVVKS 90
           WF  + P LV+NF       K+SP    +G+   K+
Sbjct: 287 WFMAWTPYLVINFSGIFNLVKISPLFTIWGSLFAKA 322


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 149 NSLPVSEEKVQTSVLLLR 202
           NSL  SEEK++  +L LR
Sbjct: 351 NSLSSSEEKLKQDILNLR 368


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 20/75 (26%), Positives = 27/75 (36%)
 Frame = +1

Query: 331 GVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKL 510
           G  Q V   N E    ++   N   +V     S EL KN D       +   T    FK+
Sbjct: 4   GKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 63

Query: 511 NNGIKLLNAAPALTD 555
           N  +      P+L D
Sbjct: 64  N--VPFEETLPSLPD 76


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 185 WFAPFPPKLVVNFVP----CKVSPDLGSFGAYVVKS 90
           WF  + P LV+NF       K+SP    +G+   K+
Sbjct: 37  WFMAWTPYLVINFSGIFNLVKISPLFTIWGSLFAKA 72


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 20/75 (26%), Positives = 27/75 (36%)
 Frame = +1

Query: 331 GVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKL 510
           G  Q V   N E    ++   N   +V     S EL KN D       +   T    FK+
Sbjct: 6   GKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 65

Query: 511 NNGIKLLNAAPALTD 555
           N  +      P+L D
Sbjct: 66  N--VPFEETLPSLPD 78


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 244 HPPLYKSCRHFHLI 203
           HP LY+  R F+L+
Sbjct: 52  HPELYQKARTFNLV 65


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 244 HPPLYKSCRHFHLI 203
           HP LY+  R F+L+
Sbjct: 52  HPELYQKARTFNLV 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,920
Number of Sequences: 438
Number of extensions: 4286
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)