BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12k01
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 4.3
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 4.3
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 22 4.3
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 22 4.3
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 22 4.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.3
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 22 5.6
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 7.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.4
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 21 7.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.8
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.8
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 442 GQLSADLKGEQRHQARRTYRHLFDCTQDDVQHCT 341
GQ+ + E RHQA +R L+ DV + T
Sbjct: 92 GQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNT 125
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 182 LIREKRLHQNSPSITIPRTNTTRT 253
+ R+ HQNSPSI I N T
Sbjct: 392 IFRQTDDHQNSPSIFISDDNQKLT 415
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = +3
Query: 162 GRSWSWNSFVRNGYI 206
G +W+WN+ +R ++
Sbjct: 23 GSNWNWNTLLRPNFL 37
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 22.2 bits (45), Expect = 4.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = +3
Query: 162 GRSWSWNSFVRNGYI 206
G +W+WN+ +R ++
Sbjct: 67 GSNWNWNTLLRPNFL 81
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 22.2 bits (45), Expect = 4.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = +3
Query: 162 GRSWSWNSFVRNGYI 206
G +W+WN+ +R ++
Sbjct: 67 GSNWNWNTLLRPNFL 81
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 22.2 bits (45), Expect = 4.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = +3
Query: 162 GRSWSWNSFVRNGYI 206
G +W+WN+ +R ++
Sbjct: 67 GSNWNWNTLLRPNFL 81
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 442 GQLSADLKGEQRHQARRTYRHLFDCTQDDVQHCT 341
GQ+ + E RHQA +R L+ DV + T
Sbjct: 92 GQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNT 125
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 178 QDQERPKKNVKKGCNKAND 122
++ ++ KN++K C+K ND
Sbjct: 30 EEAKKTIKNLRKVCSKKND 48
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 147 FTFFLGRS-WSWNSFVRNGYIK 209
F F L R W+WN + N Y K
Sbjct: 650 FGFPLDRPMWAWNFTIPNMYFK 671
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 147 FTFFLGRS-WSWNSFVRNGYIK 209
F F L R W+WN + N Y K
Sbjct: 650 FGFPLDRPMWAWNFTIPNMYFK 671
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 178 QDQERPKKNVKKGCNKAND 122
++ ++ KN++K C+K ND
Sbjct: 4 EELKKTIKNLRKVCSKKND 22
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 52 MHKKGGARASTNTYS 96
+H+KGGA N Y+
Sbjct: 65 VHEKGGASCGPNVYN 79
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NTYSEHYISIIYNHLLYYSL 144
N Y +Y + YN LYY++
Sbjct: 93 NNYKYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NTYSEHYISIIYNHLLYYSL 144
N Y +Y + YN LYY++
Sbjct: 93 NNYKYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NTYSEHYISIIYNHLLYYSL 144
N Y +Y + YN LYY++
Sbjct: 93 NNYKYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NTYSEHYISIIYNHLLYYSL 144
N Y +Y + YN LYY++
Sbjct: 93 NNYKYNYNNNNYNKKLYYNI 112
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = -2
Query: 517 ETQSQKSHNKDDTSGKERQ*YHEFNGQLSADLKGEQRHQARRTYR 383
+ Q +K HN+ + +ER + ++ + K + + R YR
Sbjct: 249 DRQYEKLHNEKEKFLEERTSHKRYSRSREREQKSYKNEREYRKYR 293
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 191 EKRLHQNSPS 220
++RLH NSPS
Sbjct: 117 DRRLHDNSPS 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,239
Number of Sequences: 438
Number of extensions: 3875
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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