Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12j22
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein. 58 3e-08
BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein. 58 3e-08
BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein. 58 3e-08
BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein. 58 3e-08
AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain prote... 58 3e-08
BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcri... 48 4e-05
AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens ... 48 4e-05
AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein. 48 4e-05
AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein. 48 4e-05
AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein. 48 4e-05
AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein. 48 4e-05
AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein. 48 4e-05
AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein. 48 4e-05
BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich d... 44 7e-04
AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein. 44 7e-04
AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich d... 44 7e-04
AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 varian... 42 0.002
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 33 1.0
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 33 1.3
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 33 1.3
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.3
BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein. 30 7.1
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 30 7.1
>CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein.
Length = 615
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 335 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 514
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 515 HHSYDSPPGLTAKQ 556
H D G +++
Sbjct: 79 HSISDDDSGCASEE 92
>BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 335 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 514
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 515 HHSYDSPPGLTAKQ 556
H D G +++
Sbjct: 79 HSISDDDSGCASEE 92
>BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 335 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 514
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 515 HHSYDSPPGLTAKQ 556
H D G +++
Sbjct: 79 HSISDDDSGCASEE 92
>BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 335 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 514
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 515 HHSYDSPPGLTAKQ 556
H D G +++
Sbjct: 79 HSISDDDSGCASEE 92
>AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain protein
protein.
Length = 615
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 335 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 514
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 515 HHSYDSPPGLTAKQ 556
H D G +++
Sbjct: 79 HSISDDDSGCASEE 92
>BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcript
(3 LIM domains) protein.
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ11513 fis, clone HEMBA1002215, highly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 44
>AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 44
>AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein.
Length = 421
Score = 47.6 bits (108), Expect = 4e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich
domains 1 protein.
Length = 365
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 344 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 448
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ12114 fis, clone MAMMA1000055, weakly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 365
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 344 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 448
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein.
Length = 365
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 344 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 448
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich
domains protein 1 protein.
Length = 365
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 344 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 448
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 variant
protein.
Length = 421
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 454
G PC C E C GF H RK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFCRKICRNCKCGQEEHDV 53
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Frame = +2
Query: 311 FSETGVRIKEVSEGRPC-DNCPELCPGFVSHAWR-------KTCKSCGCDRLKHSVYHEE 466
+ ET +++ E C ++C CPG+ WR TC++C C Y++E
Sbjct: 281 WDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDE 340
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +2
Query: 362 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 466
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein.
Length = 749
Score = 30.3 bits (65), Expect = 7.1
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCD-RLKHSVYHEEL-GSVRDRLGL---RDSRVN 514
G CD C + G+ + + C+SC CD R S + ++L G +LG R S
Sbjct: 84 GLACDRCAD---GYWNLVPGRGCQSCDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQ 140
Query: 515 HHSYDSPPG 541
+ Y PPG
Sbjct: 141 ENYYGDPPG 149
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 30.3 bits (65), Expect = 7.1
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 350 GRPCDNCPELCPGFVSHAWRKTCKSCGCD-RLKHSVYHEEL-GSVRDRLGL---RDSRVN 514
G CD C + G+ + + C+SC CD R S + ++L G +LG R S
Sbjct: 1058 GLACDRCAD---GYWNLVPGRGCQSCDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQ 1114
Query: 515 HHSYDSPPG 541
+ Y PPG
Sbjct: 1115 ENYYGDPPG 1123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,783,083
Number of Sequences: 237096
Number of extensions: 2129303
Number of successful extensions: 5732
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5730
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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