Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12j01
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006006-1|AAH06006.1|  115|Homo sapiens chromosome 17 open read...    36   0.13 
AY508814-1|AAR92035.1|  115|Homo sapiens C35 protein protein.          36   0.13 
AF490253-1|AAO85461.1|  115|Homo sapiens XTP4 protein.                 36   0.13 
CR457154-1|CAG33435.1|  137|Homo sapiens SELT protein.                 33   0.93 
BC071699-1|AAH71699.1|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC036738-1|AAH36738.3|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC026350-1|AAH26350.2|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC009611-1|AAH09611.2|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC009556-1|AAH09556.2|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC008411-1|AAH08411.2|  195|Homo sapiens selenoprotein T protein.      33   0.93 
BC006012-1|AAH06012.2|  195|Homo sapiens selenoprotein T protein.      33   0.93 
AY358096-1|AAQ88463.1|  137|Homo sapiens SELT protein.                 33   0.93 
AY358095-1|AAQ88462.1|  137|Homo sapiens SELT protein.                 33   0.93 
AF195141-1|AAF13696.1|  163|Homo sapiens selenoprotein T protein.      33   0.93 
AF131856-1|AAD20063.1|  137|Homo sapiens Unknown protein.              33   0.93 

>BC006006-1|AAH06006.1|  115|Homo sapiens chromosome 17 open reading
           frame 37 protein.
          Length = 115

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 201 TGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 347
           TG+FE+ +N +L++SKL+    P   ++ + +   S G+   +I   +P
Sbjct: 62  TGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110


>AY508814-1|AAR92035.1|  115|Homo sapiens C35 protein protein.
          Length = 115

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 201 TGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 347
           TG+FE+ +N +L++SKL+    P   ++ + +   S G+   +I   +P
Sbjct: 62  TGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110


>AF490253-1|AAO85461.1|  115|Homo sapiens XTP4 protein.
          Length = 115

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 201 TGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 347
           TG+FE+ +N +L++SKL+    P   ++ + +   S G+   +I   +P
Sbjct: 62  TGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110


>CR457154-1|CAG33435.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 87  STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124


>BC071699-1|AAH71699.1|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC036738-1|AAH36738.3|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC026350-1|AAH26350.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC009611-1|AAH09611.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC009556-1|AAH09556.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC008411-1|AAH08411.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>BC006012-1|AAH06012.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 145 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182


>AY358096-1|AAQ88463.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 87  STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124


>AY358095-1|AAQ88462.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 87  STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124


>AF195141-1|AAF13696.1|  163|Homo sapiens selenoprotein T protein.
          Length = 163

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 113 STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 150


>AF131856-1|AAD20063.1|  137|Homo sapiens Unknown protein.
          Length = 137

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +3

Query: 198 NTGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 311
           +TG+FE+ +ND  ++SKL++  LP   ++ Q++ +  K
Sbjct: 87  STGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,466,377
Number of Sequences: 237096
Number of extensions: 1866416
Number of successful extensions: 2634
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2634
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)