Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12j01
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      26   0.29 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.50 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.7  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -1

Query: 229 SFTTTSKDPVFYMYFRDETFFFI 161
           S++T+ +DP FYM +++   +F+
Sbjct: 410 SYSTSMRDPAFYMLYQNILSYFL 432


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 229 SFTTTSKDPVFYMYFRDETFFFI 161
           S++T+ +DP FYM ++    +F+
Sbjct: 410 SYSTSMRDPAFYMLYQKILSYFL 432


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 226 FTTTSKDPVFYMYFR 182
           F+T+ KDP FY  ++
Sbjct: 409 FSTSMKDPAFYRIYK 423


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 226 FTTTSKDPVFYMYFR 182
           F+T+ KDP FY  ++
Sbjct: 409 FSTSMKDPAFYRIYK 423


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 233 LIIHNYFKRPSILHVL*G 180
           LI+H Y  RP + H++ G
Sbjct: 131 LILHYYSDRPGLEHIVIG 148


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 233 LIIHNYFKRPSILHVL*G 180
           LI+H Y  RP + H++ G
Sbjct: 131 LILHYYSDRPGLEHIVIG 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,849
Number of Sequences: 438
Number of extensions: 3844
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)