Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12i16
(647 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 25 0.63
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 25 0.63
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 5.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 5.9
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 22 5.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.8
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 25.0 bits (52), Expect = 0.63
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 354 VGNTNMELMTL*LKMIMKDQSELSKLKVFFW 446
+ +TN ++ ++M + Q + SKLK++ W
Sbjct: 66 IKSTNEKITRYIIRMFLISQQKTSKLKIYKW 96
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 25.0 bits (52), Expect = 0.63
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 354 VGNTNMELMTL*LKMIMKDQSELSKLKVFFW 446
+ +TN ++ ++M + Q + SKLK++ W
Sbjct: 49 IKSTNEKITRYIIRMFLISQQKTSKLKIYKW 79
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 183 ICVSQTRHIDRCIFINSITTRPNLKLGAV*VKGVA 79
+ + + HI R + ++ R LK G + V G+A
Sbjct: 323 VIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGIA 357
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 218 SVNRNGEKDRNNLYSGNNNEQCSVENISDKVEDEQRSNEMMVLVPG-GEYQYGTD 379
+ N N + NN + NNN + +N + +N M G G Y + D
Sbjct: 232 NANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHYGHHPD 286
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 157 YMPCLAYTNYLSFGRK*LW 213
Y P + Y+N L F ++ +W
Sbjct: 295 YYPTMTYSNGLPFPQRPIW 313
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 157 YMPCLAYTNYLSFGRK*LW 213
Y P + Y+N L F ++ +W
Sbjct: 295 YYPTMTYSNGLPFPQRPIW 313
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 390 ITMSSVPYWYSPPGTNTIISLDRCSSSTLSLIFSTEHCSL 271
+ MS V +W P ++L S TLS + SL
Sbjct: 259 VIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASL 298
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -2
Query: 571 FFKGIIQKKCKHKTVSKNICLSLIICNSSK 482
FF+ IQ+K +++ +KN S++ N ++
Sbjct: 41 FFRRSIQQKIQYRPCTKNQQCSILRINRNR 70
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -2
Query: 571 FFKGIIQKKCKHKTVSKNICLSLIICNSSK 482
FF+ IQ+K +++ +KN S++ N ++
Sbjct: 90 FFRRSIQQKIQYRPCTKNQQCSILRINRNR 119
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 568 FKGIIQKKCKHKTV 527
FK ++QKKC+ + +
Sbjct: 762 FKDLVQKKCEERGI 775
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/32 (21%), Positives = 17/32 (53%)
Frame = +2
Query: 116 LGLVVIELINMHLSICLVWLTQIIFPLVGSDC 211
+G++ + +M IC + +++ + GS C
Sbjct: 644 IGVLTLVATSMPTYICYLGKAYLMYAIAGSQC 675
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 449 KYEVSNQDFKHFTRVTNYKTEADI 520
K+E N D+ H T + + DI
Sbjct: 225 KHESDNSDYSHTTDENRHSSTLDI 248
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,342
Number of Sequences: 438
Number of extensions: 3984
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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