Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12i14
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    47   2e-07
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           47   2e-07
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    37   2e-04
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    37   2e-04
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.7  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 20/50 (40%), Positives = 31/50 (62%)
 Frame = +1

Query: 187 GGRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFKA 336
           G  + ++P V    G ++G    S +GK + +++GIPYA PP+G  RFKA
Sbjct: 16  GWTLEDAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKA 65


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 20/50 (40%), Positives = 31/50 (62%)
 Frame = +1

Query: 187 GGRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFKA 336
           G  + ++P V    G ++G    S +GK + +++GIPYA PP+G  RFKA
Sbjct: 16  GWTLEDAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKA 65


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 190 GRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFK 333
           G +   PLV      L      +   K  + F GIP+AKPP+G LRF+
Sbjct: 31  GNVHNDPLVVETTSGLVRGFPRTVLDKEVHVFYGIPFAKPPIGPLRFR 78


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 190 GRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFK 333
           G +   PLV      L      +   K  + F GIP+AKPP+G LRF+
Sbjct: 31  GNVHNDPLVVETTSGLVRGFPRTVLDKEVHVFYGIPFAKPPIGPLRFR 78


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 487 RVHYHFGMEESS 522
           R++YHFGM ++S
Sbjct: 225 RINYHFGMTDNS 236



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +2

Query: 419 HYIHDHEISHRFIDDSAFINLKRGCITILEWRNQ--------A*ISFFVINGALSVPSVS 574
           H+ +D+E+S  +ID+    N       IL +             ++++  NG + VPS  
Sbjct: 767 HHEYDYELSRGYIDEKILENQNIITHMILNYVGSEDSVIPRILYLTWYSSNGDIKVPSTK 826

Query: 575 VL 580
           VL
Sbjct: 827 VL 828


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 149 IVGNSLFTPELLIKILFNSLHRCFIHSL 66
           IVGN+L    ++      S+  CF+ SL
Sbjct: 52  IVGNTLVIAAVITTRRLRSVTNCFVSSL 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,508
Number of Sequences: 438
Number of extensions: 4078
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)