Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12i04
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056641-1|BAB71239.1|  696|Homo sapiens protein ( Homo sapiens ...    34   0.47 
BC027611-1|AAH27611.1|  696|Homo sapiens zinc finger, SWIM-type ...    33   0.82 
AL008726-9|CAC36014.1|  696|Homo sapiens zinc finger, SWIM-type ...    33   0.82 
BC029221-1|AAH29221.2|  288|Homo sapiens transmembrane and coile...    31   3.3  
AY692424-1|AAW47397.1| 1117|Homo sapiens ADAMTS6 variant 2 protein.    30   7.6  
AY692423-1|AAW47396.1|  270|Homo sapiens ADAMTS6 variant 2 protein.    30   7.6  
AK131039-1|BAC85480.1|  288|Homo sapiens protein ( Homo sapiens ...    30   7.6  
AB209685-1|BAD92922.1|  530|Homo sapiens a disintegrin and metal...    30   7.6  

>AK056641-1|BAB71239.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32079 fis, clone OCBBF2000013. ).
          Length = 696

 Score = 33.9 bits (74), Expect = 0.47
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -1

Query: 280 SQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIR--KVVPTIHLNTHTRTICIQCM 107
           S K   LF+ F    L H  E   GHI Y+  V    R  +VV    L   T T   + +
Sbjct: 207 SSKMTDLFIRFPENLLLHRVENTQGHILYAFLVENKERESRVVHFAVLKAETATSVAKML 266

Query: 106 ----VYGRDWPVVEIAFI 65
                +  DWP V++ F+
Sbjct: 267 SIFTEFNSDWPKVKVVFV 284


>BC027611-1|AAH27611.1|  696|Homo sapiens zinc finger, SWIM-type
           containing 3 protein.
          Length = 696

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -1

Query: 280 SQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIR--KVVPTIHLNTHTRTICIQCM 107
           S K   LF+ F    L H  E   GHI Y+  V    R  +VV    L   T T   + +
Sbjct: 207 SSKMTDLFIRFPENLLLHRVENTQGHILYAFLVENKERESRVVHFAVLKAETVTSVAKML 266

Query: 106 ----VYGRDWPVVEIAFI 65
                +  DWP V++ F+
Sbjct: 267 SIFTEFNSDWPKVKVVFV 284


>AL008726-9|CAC36014.1|  696|Homo sapiens zinc finger, SWIM-type
           containing 3 protein.
          Length = 696

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -1

Query: 280 SQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIR--KVVPTIHLNTHTRTICIQCM 107
           S K   LF+ F    L H  E   GHI Y+  V    R  +VV    L   T T   + +
Sbjct: 207 SSKMTDLFIRFPENLLLHRVENTQGHILYAFLVENKERESRVVHFAVLKAETVTSVAKML 266

Query: 106 ----VYGRDWPVVEIAFI 65
                +  DWP V++ F+
Sbjct: 267 SIFTEFNSDWPKVKVVFV 284


>BC029221-1|AAH29221.2|  288|Homo sapiens transmembrane and
           coiled-coil domains 5 protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -1

Query: 283 PSQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIRKVVPTIHLN 140
           P+QK A LF   +F CLF    I L  I   +Y+F ++R + P + +N
Sbjct: 212 PTQKTARLFSKKIFCCLFF---ITLFFIRLLSYMFFHVRFINPDLLVN 256


>AY692424-1|AAW47397.1| 1117|Homo sapiens ADAMTS6 variant 2 protein.
          Length = 1117

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 559 RLDNESFIKNNVCDVTGRAPGQQRS 485
           RLD+ S ++NN CD   + P  QR+
Sbjct: 869 RLDDNSIVQNNYCDPDSKPPENQRA 893


>AY692423-1|AAW47396.1|  270|Homo sapiens ADAMTS6 variant 2 protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 559 RLDNESFIKNNVCDVTGRAPGQQRS 485
           RLD+ S ++NN CD   + P  QR+
Sbjct: 22  RLDDNSIVQNNYCDPDSKPPENQRA 46


>AK131039-1|BAC85480.1|  288|Homo sapiens protein ( Homo sapiens
           cDNA FLJ29005 fis, clone TST07872. ).
          Length = 288

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 559 RLDNESFIKNNVCDVTGRAPGQQRS 485
           RLD+ S ++NN CD   + P  QR+
Sbjct: 40  RLDDNSIVQNNYCDPDSKPPENQRA 64


>AB209685-1|BAD92922.1|  530|Homo sapiens a disintegrin and
           metalloprotease with thrombospondin motifs-6 variant
           protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 559 RLDNESFIKNNVCDVTGRAPGQQRS 485
           RLD+ S ++NN CD   + P  QR+
Sbjct: 282 RLDDNSIVQNNYCDPDSKPPENQRA 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,420,629
Number of Sequences: 237096
Number of extensions: 1727458
Number of successful extensions: 2969
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)