Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12h23
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065028-1|AAH65028.1| 380|Homo sapiens nucleoporin 43kDa protein. 100 4e-21
AF514997-1|AAM76708.1| 380|Homo sapiens nucleoporin Nup43 protein. 100 4e-21
AL355312-1|CAH72860.1| 248|Homo sapiens nucleoporin 43kDa protein. 66 1e-10
BC040121-1|AAH40121.1| 287|Homo sapiens NUP43 protein protein. 63 8e-10
BC068485-1|AAH68485.1| 383|Homo sapiens WD repeat domain 55 pro... 46 8e-05
AK025355-1|BAB15118.1| 383|Homo sapiens protein ( Homo sapiens ... 46 8e-05
EF011620-1|ABK41110.1| 358|Homo sapiens CDW10/WDR53 protein. 33 1.00
BC054030-1|AAH54030.1| 358|Homo sapiens WD repeat domain 53 pro... 33 1.00
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 30 5.3
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 30 5.3
D87716-1|BAA13441.1| 459|Homo sapiens KIAA0007 protein. 30 5.3
D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein. 30 5.3
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 30 5.3
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 30 5.3
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 30 5.3
AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein. 30 5.3
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 30 5.3
BC117246-1|AAI17247.1| 707|Homo sapiens F-box and WD repeat dom... 29 9.3
BC117244-1|AAI17245.1| 707|Homo sapiens F-box and WD repeat dom... 29 9.3
BC037320-1|AAH37320.1| 621|Homo sapiens FBXW7 protein protein. 29 9.3
AY049984-1|AAL07271.1| 707|Homo sapiens F-box protein CDC4 prot... 29 9.3
AY033553-1|AAK57547.1| 627|Homo sapiens F-box protein FBW7 prot... 29 9.3
AY008274-1|AAG16640.1| 589|Homo sapiens F-box protein SEL10 pro... 29 9.3
AK223449-1|BAD97169.1| 627|Homo sapiens F-box protein FBW7 isof... 29 9.3
AK001933-1|BAA91986.1| 553|Homo sapiens protein ( Homo sapiens ... 29 9.3
AF411972-1|AAL06291.1| 627|Homo sapiens archipelago beta form p... 29 9.3
AF411971-1|AAL06290.1| 707|Homo sapiens archipelago alpha form ... 29 9.3
AF383178-1|AAK60269.1| 561|Homo sapiens F-box protein FBX30 pro... 29 9.3
AB209725-1|BAD92962.1| 624|Homo sapiens F-box protein FBW7 isof... 29 9.3
>BC065028-1|AAH65028.1| 380|Homo sapiens nucleoporin 43kDa protein.
Length = 380
Score = 100 bits (239), Expect = 4e-21
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Frame = +1
Query: 19 DIQGTFVSQKINKVRW--IPEDYAET-KCFLTGSWDDEVNLITVWT---FESVNEDEEVE 180
+I FVSQKI+K RW +P +T + F TGSWD+E N I++W+ F +++ D E
Sbjct: 3 EIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGGFE 62
Query: 181 YP-RALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH- 354
+ L DV ++F ++ +I + S G V + + + QT L W + H
Sbjct: 63 GDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHY 120
Query: 355 -------NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSI 513
+Y + C+ + E I ++GEDG +N+ E RTI ADS +LH++
Sbjct: 121 HTGPGSPSYSSAPCTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAV 178
Query: 514 CYLKHTEVITGNIRGHIKIWDLRSE 588
+L+ E++T N G +KIWD R +
Sbjct: 179 TFLRTPEILTVNSIGQLKIWDFRQQ 203
>AF514997-1|AAM76708.1| 380|Homo sapiens nucleoporin Nup43 protein.
Length = 380
Score = 100 bits (239), Expect = 4e-21
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Frame = +1
Query: 19 DIQGTFVSQKINKVRW--IPEDYAET-KCFLTGSWDDEVNLITVWT---FESVNEDEEVE 180
+I FVSQKI+K RW +P +T + F TGSWD+E N I++W+ F +++ D E
Sbjct: 3 EIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGGFE 62
Query: 181 YP-RALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH- 354
+ L DV ++F ++ +I + S G V + + + QT L W + H
Sbjct: 63 GDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHY 120
Query: 355 -------NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSI 513
+Y + C+ + E I ++GEDG +N+ E RTI ADS +LH++
Sbjct: 121 HTGPGSPSYSSAPCTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAV 178
Query: 514 CYLKHTEVITGNIRGHIKIWDLRSE 588
+L+ E++T N G +KIWD R +
Sbjct: 179 TFLRTPEILTVNSIGQLKIWDFRQQ 203
>AL355312-1|CAH72860.1| 248|Homo sapiens nucleoporin 43kDa protein.
Length = 248
Score = 65.7 bits (153), Expect = 1e-10
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Frame = +1
Query: 19 DIQGTFVSQKINKVRW--IPEDYAET-KCFLTGSWDDEVNLITVWT---FESVNEDEEVE 180
+I FVSQKI+K RW +P +T + F TGSWD+E N I++W+ F +++ D E
Sbjct: 64 EIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGGFE 123
Query: 181 YP-RALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH- 354
+ L DV ++F ++ +I + S G V + + + QT L W + H
Sbjct: 124 GDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHY 181
Query: 355 -------NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSC 498
+Y + C+ + E I ++GEDG +N+ E RTI C
Sbjct: 182 HTGPGSPSYSSAPCTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIGLVTEC 234
>BC040121-1|AAH40121.1| 287|Homo sapiens NUP43 protein protein.
Length = 287
Score = 62.9 bits (146), Expect = 8e-10
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 355 NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTE 534
+Y + C+ + E I ++GEDG +N+ E RTI ADS +LH++ +L+ E
Sbjct: 35 SYSSAPCTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTFLRTPE 92
Query: 535 VITGNIRGHIKIWDLRSE 588
++T N G +KIWD R +
Sbjct: 93 ILTVNSIGQLKIWDFRQQ 110
>BC068485-1|AAH68485.1| 383|Homo sapiens WD repeat domain 55
protein.
Length = 383
Score = 46.4 bits (105), Expect = 8e-05
Identities = 28/115 (24%), Positives = 58/115 (50%)
Frame = +1
Query: 244 KNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIG 423
++ +A +GDV + S + +T KE+ W S H+ + A S D + + ++
Sbjct: 50 RDLLAAGDVDGDVFVFSYSCQEGET--KEL--WSSGHHLKACRAVAFSEDGQK--LITVS 103
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
+D +++L +G++ R + A ++S+ + + TG+ G I++WD R E
Sbjct: 104 KDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKE 158
>AK025355-1|BAB15118.1| 383|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21702 fis, clone COL09874. ).
Length = 383
Score = 46.4 bits (105), Expect = 8e-05
Identities = 28/115 (24%), Positives = 58/115 (50%)
Frame = +1
Query: 244 KNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIG 423
++ +A +GDV + S + +T KE+ W S H+ + A S D + + ++
Sbjct: 50 RDLLAAGDVDGDVFVFSYSCQEGET--KEL--WSSGHHLKACRAVAFSEDGQK--LITVS 103
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
+D +++L +G++ R + A ++S+ + + TG+ G I++WD R E
Sbjct: 104 KDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKE 158
>EF011620-1|ABK41110.1| 358|Homo sapiens CDW10/WDR53 protein.
Length = 358
Score = 32.7 bits (71), Expect = 1.00
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 403 GDIASIG-EDGNVNI--LSGRRGEVNRTIKGADSCSLHSICYLKHTEVI-TGNIRGHIKI 570
G+I S G EDG V I + G + E KG S + +C+L + ++ TG G I +
Sbjct: 209 GNIFSCGAEDGKVRIFRVMGVKCEQELGFKGHTS-GVSQVCFLPESYLLLTGGNDGKITL 267
Query: 571 WDLRSE 588
WD SE
Sbjct: 268 WDANSE 273
>BC054030-1|AAH54030.1| 358|Homo sapiens WD repeat domain 53
protein.
Length = 358
Score = 32.7 bits (71), Expect = 1.00
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 403 GDIASIG-EDGNVNI--LSGRRGEVNRTIKGADSCSLHSICYLKHTEVI-TGNIRGHIKI 570
G+I S G EDG V I + G + E KG S + +C+L + ++ TG G I +
Sbjct: 209 GNIFSCGAEDGKVRIFRVMGVKCEQELGFKGHTS-GVSQVCFLPESYLLLTGGNDGKITL 267
Query: 571 WDLRSE 588
WD SE
Sbjct: 268 WDANSE 273
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 164 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 222
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 223 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 277
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 308 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 366
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 367 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 421
>D87716-1|BAA13441.1| 459|Homo sapiens KIAA0007 protein.
Length = 459
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 97 FLTGSWDDEVNLITVWTFESVNEDEEVEYPRALTKYPVDDDVTQIKFTEKN-KIAVSISN 273
FL+G+ D L+ VW S N+++ +T PV D+T + E+ K+AV +
Sbjct: 81 FLSGAVHDR--LLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRD 138
Query: 274 GDVKILE 294
G V + E
Sbjct: 139 GQVHLFE 145
>D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein.
Length = 686
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 97 FLTGSWDDEVNLITVWTFESVNEDEEVEYPRALTKYPVDDDVTQIKFTEKN-KIAVSISN 273
FL+G+ D L+ VW S N+++ +T PV D+T + E+ K+AV +
Sbjct: 245 FLSGAVHDR--LLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRD 302
Query: 274 GDVKILE 294
G V + E
Sbjct: 303 GQVHLFE 309
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 243 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 301
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 302 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 356
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 195 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 253
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 254 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 308
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 327 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 385
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 386 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
>AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein.
Length = 470
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 327 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 385
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 386 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 30.3 bits (65), Expect = 5.3
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 256 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 423
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 243 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 301
Query: 424 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 588
D I + + T+ G L + L + +++G+ +K+WDLRS+
Sbjct: 302 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 356
>BC117246-1|AAI17247.1| 707|Homo sapiens F-box and WD repeat domain
containing 7 protein.
Length = 707
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 574 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 633
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 634 KNFVITSSDDGTVKLWDLKT 653
>BC117244-1|AAI17245.1| 707|Homo sapiens F-box and WD repeat domain
containing 7 protein.
Length = 707
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 574 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 633
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 634 KNFVITSSDDGTVKLWDLKT 653
>BC037320-1|AAH37320.1| 621|Homo sapiens FBXW7 protein protein.
Length = 621
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 488 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 547
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 548 KNFVITSSDDGTVKLWDLKT 567
>AY049984-1|AAL07271.1| 707|Homo sapiens F-box protein CDC4
protein.
Length = 707
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 574 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 633
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 634 KNFVITSSDDGTVKLWDLKT 653
>AY033553-1|AAK57547.1| 627|Homo sapiens F-box protein FBW7
protein.
Length = 627
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 494 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 553
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 554 KNFVITSSDDGTVKLWDLKT 573
>AY008274-1|AAG16640.1| 589|Homo sapiens F-box protein SEL10
protein.
Length = 589
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 456 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 515
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 516 KNFVITSSDDGTVKLWDLKT 535
>AK223449-1|BAD97169.1| 627|Homo sapiens F-box protein FBW7 isoform
2 variant protein.
Length = 627
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 494 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 553
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 554 KNFVITSSDDGTVKLWDLKT 573
>AK001933-1|BAA91986.1| 553|Homo sapiens protein ( Homo sapiens
cDNA FLJ11071 fis, clone PLACE1004937, moderately
similar to SEL-10 PROTEIN. ).
Length = 553
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 420 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 479
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 480 KNFVITSSDDGTVKLWDLKT 499
>AF411972-1|AAL06291.1| 627|Homo sapiens archipelago beta form
protein.
Length = 627
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 494 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 553
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 554 KNFVITSSDDGTVKLWDLKT 573
>AF411971-1|AAL06290.1| 707|Homo sapiens archipelago alpha form
protein.
Length = 707
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 574 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 633
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 634 KNFVITSSDDGTVKLWDLKT 653
>AF383178-1|AAK60269.1| 561|Homo sapiens F-box protein FBX30
protein.
Length = 561
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 428 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 487
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 488 KNFVITSSDDGTVKLWDLKT 507
>AB209725-1|BAD92962.1| 624|Homo sapiens F-box protein FBW7 isoform
2 variant protein.
Length = 624
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 349 LHNYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICY-LK 525
+H + + ++ + + S D V I + G+ +T++G + C
Sbjct: 491 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 550
Query: 526 HTEVITGNIRGHIKIWDLRS 585
VIT + G +K+WDL++
Sbjct: 551 KNFVITSSDDGTVKLWDLKT 570
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,875,058
Number of Sequences: 237096
Number of extensions: 1850021
Number of successful extensions: 2475
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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