Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12h10
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 127 1e-30
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 92 5e-20
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 90 2e-19
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 74 2e-14
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 68 1e-12
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 48 7e-07
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 46 5e-06
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 42 9e-05
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.010
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.5
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.5
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 4.5
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 6.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 127 bits (307), Expect = 1e-30
Identities = 63/107 (58%), Positives = 72/107 (67%)
Frame = +3
Query: 255 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 434
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 435 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAG 575
NFMIQ +SIYG RF DENFKL H G LSMANAG
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAG 127
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 92.3 bits (219), Expect = 5e-20
Identities = 48/97 (49%), Positives = 54/97 (55%)
Frame = +3
Query: 285 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 464
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 465 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAG 575
+SIYGE+F DENF LKH G LSMANAG
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAG 102
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 89.8 bits (213), Expect = 2e-19
Identities = 53/104 (50%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Frame = +3
Query: 276 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 443
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 444 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAG 575
M+Q SIYGE+FEDENF+LKH LSMANAG
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAG 107
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 73.7 bits (173), Expect = 2e-14
Identities = 49/108 (45%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Frame = +3
Query: 279 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 434
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 435 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAG 575
+ FMIQ +I+ R F DENF LKH G LSMANAG
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAG 112
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 67.7 bits (158), Expect = 1e-12
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 309 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 488
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 489 RSIYGERFEDE-NFKLKHYGAGWLSMANAG 575
SIYG++F+DE + L H GAG LSMANAG
Sbjct: 65 TSIYGDKFDDEIHSDLHHTGAGILSMANAG 94
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 48.4 bits (110), Expect = 7e-07
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 315 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 494
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 495 IYGERFEDE-NFKLKHYGAGWLSMANAG 575
I+ + FEDE + LKH +SMAN+G
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSG 547
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 45.6 bits (103), Expect = 5e-06
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 309 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 488
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 489 RSIYGERFEDENFK-LKHYGAGWLSMANAG 575
+SI+G+ F+DE LKH G +SMAN G
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRG 368
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 41.5 bits (93), Expect = 9e-05
Identities = 33/85 (38%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 315 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 494
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 495 IYGERFEDENF-KLKHYGAGWLSMA 566
IYGE F E +L+ G + MA
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMA 102
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.7 bits (76), Expect = 0.010
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +3
Query: 303 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 482
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 483 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANA 572
R ++ G RF F L H G +SM+ A
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTA 99
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 491 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 339
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 4.5
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 301 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 158
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 173 FSSFPCYFYKIRFECLFFQNLRY 105
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 6.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 129 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 281
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,285,064
Number of Sequences: 5004
Number of extensions: 44693
Number of successful extensions: 127
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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