Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12h03
         (582 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071493-1|AAL49115.1|  192|Drosophila melanogaster RE55690p pro...    98   7e-21
AY071358-1|AAL48980.1|  192|Drosophila melanogaster RE39465p pro...    98   7e-21
AE014296-2714|AAF49479.1|  192|Drosophila melanogaster CG4893-PA...    98   7e-21
AE014296-1774|AAF50188.1|  117|Drosophila melanogaster CG6709-PA...    35   0.092
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P...    29   3.5  
BT021287-1|AAX33435.1|  826|Drosophila melanogaster RE31991p pro...    28   8.0  
AY118641-1|AAM50010.1|  678|Drosophila melanogaster SD02507p pro...    28   8.0  
AE014134-2952|AAF53685.2|  826|Drosophila melanogaster CG31790-P...    28   8.0  

>AY071493-1|AAL49115.1|  192|Drosophila melanogaster RE55690p
           protein.
          Length = 192

 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 406 GDPKSDGKAITLPQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 582
           GD KSDGK ITL QSDKWMKQAKVID KKITTTDT IHFKK K++K+ + DY KFLDDL
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKKFKAMKISLSDYNKFLDDL 105


>AY071358-1|AAL48980.1|  192|Drosophila melanogaster RE39465p
           protein.
          Length = 192

 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 406 GDPKSDGKAITLPQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 582
           GD KSDGK ITL QSDKWMKQAKVID KKITTTDT IHFKK K++K+ + DY KFLDDL
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKKFKAMKISLSDYNKFLDDL 105


>AE014296-2714|AAF49479.1|  192|Drosophila melanogaster CG4893-PA
           protein.
          Length = 192

 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 406 GDPKSDGKAITLPQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 582
           GD KSDGK ITL QSDKWMKQAKVID KKITTTDT IHFKK K++K+ + DY KFLDDL
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIHFKKFKAMKISLSDYNKFLDDL 105


>AE014296-1774|AAF50188.1|  117|Drosophila melanogaster CG6709-PA
           protein.
          Length = 117

 Score = 34.7 bits (76), Expect = 0.092
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +1

Query: 430 AITLPQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 582
           +I L Q D W++QAK++    IT T T + + + K  +L  +D+ + L++L
Sbjct: 37  SILLSQLDAWLEQAKLMP-NPITRTQTGLIYMRYKKWRLEYEDFLEVLNNL 86


>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
           isoform A protein.
          Length = 1788

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 229 RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTS 345
           RK+  + +NT A ++Q  +E++D    NG +  ASN TS
Sbjct: 505 RKVRGKRRNTIAGIDQ--KEIQDAANGNGESKNASNATS 541


>BT021287-1|AAX33435.1|  826|Drosophila melanogaster RE31991p
           protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 429 SHHAPAKRQMDEASQSH*WKENNN-NGHGHSL-QKTQIGKTRHRRL 560
           SHH+P        S SH    + + +GHGHS   + Q  K+R +RL
Sbjct: 746 SHHSPPSEH-HHGSSSHVHNHHGHGHGHGHSSHSRRQRSKSRDKRL 790


>AY118641-1|AAM50010.1|  678|Drosophila melanogaster SD02507p
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 429 SHHAPAKRQMDEASQSH*WKENNN-NGHGHSL-QKTQIGKTRHRRL 560
           SHH+P        S SH    + + +GHGHS   + Q  K+R +RL
Sbjct: 598 SHHSPPSEH-HHGSSSHVHNHHGHGHGHGHSSHSRRQRSKSRDKRL 642


>AE014134-2952|AAF53685.2|  826|Drosophila melanogaster CG31790-PA
           protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 429 SHHAPAKRQMDEASQSH*WKENNN-NGHGHSL-QKTQIGKTRHRRL 560
           SHH+P        S SH    + + +GHGHS   + Q  K+R +RL
Sbjct: 746 SHHSPPSEH-HHGSSSHVHNHHGHGHGHGHSSHSRRQRSKSRDKRL 790


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,042,472
Number of Sequences: 53049
Number of extensions: 481475
Number of successful extensions: 1854
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)