Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12g13
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 25 0.60
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.0
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 23 1.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 1.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 2.4
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 2.4
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 3.2
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 5.6
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 5.6
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.8
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 25.0 bits (52), Expect = 0.60
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 LQHGARMLVEFLAQL-TSVERVLEYTKIESEKNLFEGQKPMPPTWPAHGRIIMD 166
L++ + L+EF A L T V E K S + E Q+P+PP P G ++D
Sbjct: 5 LKNIMKPLMEFSATLDTVVPNSGELFKAGSAEQPKE-QEPLPPVTPPQGENMLD 57
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 549 LDPPSVTLKSNEGTAAFMSTCSNALQSSSSLYTLNGSKLYLIVAENN 409
L+PP V L S + + ++ ++S+LY+ L+L + +N
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 549 LDPPSVTLKSNEGTAAFMSTCSNALQSSSSLYTLNGSKLYLIVAENN 409
L+PP V L S + + ++ ++S+LY+ L+L + +N
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 549 LDPPSVTLKSNEGTAAFMSTCSNALQSSSSLYTLNGSKLYLIVAENN 409
L+PP V L S + + ++ ++S+LY+ L+L + +N
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 184 RSRRRSSAEKPQHRY*KWMEGRYSRQDWSRKILTDIRLVQIRVYRWLYNYR 336
R R SAE+ ++ E RY + +++ D+ L + ++ W N R
Sbjct: 22 RPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKR 72
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 568 SLAHGEVRSTFCHFEIQRRNGRFHVHLF 485
+L+H E +F +QR G F + ++
Sbjct: 194 TLSHAEYSMLLVYFHLQRHMGNFLIQVY 221
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 291 DISEDFPAPVLPTIPTFHPLSITMLRFFSTASSSGAYCKL 172
D E+ P L PT+ +S ++ + G YC+L
Sbjct: 176 DSKEEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRL 215
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 141 GQVGGIGFCPSKRFFS 94
G +GG G CPS FS
Sbjct: 29 GGLGGRGKCPSNEIFS 44
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 141 GQVGGIGFCPSKRFFS 94
G +GG G CPS FS
Sbjct: 29 GGLGGRGKCPSNEIFS 44
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.2
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 59 VERVLEYTKIES-EKNLFEGQKPMP-PTWPAHG--RIIMDNVSLQYAPEEEAVLKNLNIV 226
VE + + K ++ + N+ P P ++ A G I++DN+ + V K+ +
Sbjct: 170 VEIGINFDKYDNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPI 229
Query: 227 IESGWKVGIVGRTGAGKSS 283
I +G + +TG+GK++
Sbjct: 230 IMNGRDLMACAQTGSGKTA 248
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 197 EAVLKNLNIVIESG-WKVGIV 256
E +LK NIV ESG +K IV
Sbjct: 64 ECILKQFNIVDESGNFKENIV 84
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 197 EAVLKNLNIVIESG-WKVGIV 256
E +LK NIV ESG +K IV
Sbjct: 64 ECILKQFNIVDESGNFKENIV 84
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 461 DDELWRALEQ 490
DDE WR +EQ
Sbjct: 828 DDECWRLMEQ 837
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 461 DDELWRALEQ 490
DDE WR +EQ
Sbjct: 866 DDECWRLMEQ 875
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.8
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +2
Query: 374 RSKISIIPQEPVLFSATIRYNLDPFSVYSDDELWRALEQVDMKAAVPSLDFKV 532
R K + + VL + I + + YS+ W Q+ +K +DFK+
Sbjct: 475 RPKSNTVENACVLKNTEIFKDKSDWFDYSEVSKWVQKGQICLKEKENEIDFKI 527
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,203
Number of Sequences: 438
Number of extensions: 3985
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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