Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12f18
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    26   1.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.6  
AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.       24   4.7  

>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 58  IVAYYRRRLHPAVEKYSLMMILLRKK 135
           + AY R RL+P + +Y+L + L+ +K
Sbjct: 112 VAAYARDRLNPTLFQYALAVALVHRK 137


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 255 NFFILKNKRQTHQSIRN 205
           NF+ LK K+  +QS+RN
Sbjct: 454 NFYELKKKKDHYQSLRN 470


>AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.
          Length = 103

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 42  MRRTIHCGVLQETPTSSSGKIQPDDDTIKKKILMLK 149
           +RR   CG L  +P S +     DDD     ++  K
Sbjct: 56  VRRRTRCGSLCGSPVSRAQTDDDDDDAAAASVMWCK 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,974
Number of Sequences: 2352
Number of extensions: 13035
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)