Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12f15
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0214 - 1615519-1616775 33 0.047
03_04_0055 + 16891212-16891848,16893166-16893206 30 0.33
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 30 0.33
08_02_0311 - 15635165-15635590,15635777-15638698 29 0.58
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 28 1.0
03_05_0618 + 26177743-26178420,26179477-26179617 27 3.1
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 27 3.1
11_06_0377 - 22900042-22900452,22900527-22902236 26 4.1
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 26 4.1
07_03_1214 + 24931142-24932314,24934177-24934434 26 4.1
02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204 26 4.1
01_06_1568 - 38299113-38299790,38300165-38300254,38300368-383004... 26 4.1
01_06_0312 + 28396860-28397951 26 4.1
08_01_0112 - 885965-886010,887084-887145,887908-887976,888076-88... 25 7.1
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 25 7.1
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 25 7.1
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 25 7.1
11_07_0007 - 27262229-27262638,27263252-27263312 25 9.4
11_06_0289 - 21969248-21973516 25 9.4
09_02_0515 + 10121849-10122149,10132151-10132187,10132314-101327... 25 9.4
09_02_0274 + 6611555-6611615,6612229-6612638 25 9.4
07_01_0907 - 7636725-7637681 25 9.4
05_05_0071 - 22159793-22159809,22159893-22159953,22160041-221602... 25 9.4
03_02_0903 + 12285874-12285918,12286715-12286820,12286906-122869... 25 9.4
01_05_0696 - 24366857-24368200 25 9.4
>05_01_0214 - 1615519-1616775
Length = 418
Score = 32.7 bits (71), Expect = 0.047
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 98 DRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQH 205
D GH G GH G H H G + H+D++H
Sbjct: 183 DHGH-GHGHGHGHGHSHDHDHGGSDHDHHHHEDQEH 217
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 119 GHDEGRSHLPGLGHAGQEDLQRRHDDEQH 205
GHD G H G GH D D H
Sbjct: 181 GHDHGHGHGHGHGHGHSHDHDHGGSDHDH 209
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 110 LGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 211
LG H G H G GH+ D D H E
Sbjct: 180 LGHDHGHGHGHGHGHGHSHDHDHGGSDHDHHHHE 213
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 74 PRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 211
P + QQ H+ G G H PG G G +DE DE
Sbjct: 175 PPPQQQQQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHDEDEDEDE 220
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 29.9 bits (64), Expect = 0.33
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 89 HQQDRGHLGDGHDEGRSHLP----GLGHAGQEDLQRRHDDEQHDE 211
H ++ H + DE + GLG ++DL++ HD E DE
Sbjct: 166 HGMEKDHTKEEKDESNKEMDDSEKGLGKEEKDDLEKDHDKEDRDE 210
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 86 EHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 208
EH + + D +G+ HLPG G G + L R+ + + D
Sbjct: 184 EHYKIGEYADDDPHDGKLHLPGPGGGGNKSLLARNQNGEFD 224
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 68 KRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 211
K RH + DG DE R + H +E+ + RHD + H +
Sbjct: 202 KSKRHHSSENSDSEESDGRDERRKSVQASEHK-REEKRSRHDKKDHGQ 248
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 NDLQKRPRHVEHQQDRGHLGDGH-DEGRSHLPGLGHAGQEDLQRRHDDEQHDE 211
ND + ++D G G+G DE G G ED + D+E+ +E
Sbjct: 169 NDCLDSDDEEDEEEDEGEEGEGEGDEEEEEEGGEEGEGDEDDEEEGDEEEDEE 221
>02_04_0625 - 24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 128 EGRS-HLPGLGHAGQEDLQRRHDDEQH 205
+GR HL HAG+ L RR DDE H
Sbjct: 1140 DGRGEHLAAGDHAGRVILFRRTDDESH 1166
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 47 R*RNDLQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQE-DLQRRHDDEQ 202
R R ++ R E D G G HD+G G G G E +DD+Q
Sbjct: 251 RARYGVETRGFCAEDVGDEGRRGRAHDDGHERHRGRGRVGGERQSSCANDDDQ 303
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +2
Query: 14 HGELLH*QHEVR*RNDLQKRPRHVEHQQDRGHLGDGHDE-GR---------SHLPGLGHA 163
HG + + R R+ + R R E +DRGH D H E GR SH GH
Sbjct: 356 HGRDRDRERDRRDRDRDRDRGRDYERDRDRGH--DRHRERGRDRERDYERASHERDRGHM 413
Query: 164 GQEDLQRRHDDEQHDE 211
+ D + + + +HD+
Sbjct: 414 HERDAEFANGEPKHDQ 429
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 98 DRGHLGDGHDEGRSHLPGL-GHAGQEDLQRRHDDEQHDE 211
D G DGH+ G G G+ED +R DD ++E
Sbjct: 341 DVGEEIDGHEHGEGEDEDENGEIGEEDEERLEDDRVYEE 379
>02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204
Length = 291
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 104 GHLGDGHDEGRSHLPGLGHAGQEDLQRRH 190
GH G GH GR P +G GQ ++H
Sbjct: 28 GHHGLGHGHGRWRAPHVGGHGQGQGPQQH 56
>01_06_1568 -
38299113-38299790,38300165-38300254,38300368-38300484,
38300600-38300962
Length = 415
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 86 EHQQDRGHLGDGHDEGRSHLPG-LGHAGQED-LQRRHDDEQHDE 211
EH+++ H D HLPG G Q D + RR + ++ DE
Sbjct: 211 EHEEEADHEADHEGHRVHHLPGHAGVVAQHDVVVRRGERDEGDE 254
>01_06_0312 + 28396860-28397951
Length = 363
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 65 QKRPRHVEHQQDRGHLGDG 121
QKRPR V + +R +GDG
Sbjct: 18 QKRPRRVSVRMERSRVGDG 36
>08_01_0112 -
885965-886010,887084-887145,887908-887976,888076-888123,
888205-888264,888392-888504,888578-888650,888725-888769,
889382-889527,890782-890842,891913-892056,892164-892400
Length = 367
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 119 GHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELITR 223
G G G GHAG+ + R Q DE+I R
Sbjct: 83 GGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRR 117
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 95 QDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDE 199
+D GH GD +EG+ G QE HD E
Sbjct: 90 EDNGHGGDQWEEGQGESQGSSGMAQEIEGDSHDVE 124
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 95 QDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELITR 223
+DRG + + G+GH +E L+ + +H++ TR
Sbjct: 695 KDRGQPQGNEEASLTLKDGIGHYSEEKLEVNCSERKHEDTQTR 737
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 131 LHHDHLRGVHGLAGVRHAEVF 69
LH DH RG+ G RH ++
Sbjct: 23 LHQDHTRGLGAAGGWRHGPLY 43
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 104 GHLGDGHDEGRSHLPGLGHAGQ 169
G G GR LPG GH GQ
Sbjct: 126 GGAGGSSGGGRRSLPGHGHGGQ 147
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 25.0 bits (52), Expect = 9.4
Identities = 7/39 (17%), Positives = 22/39 (56%)
Frame = +2
Query: 92 QQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 208
+ ++ GDG +EG+ + G+E +++ ++++ +
Sbjct: 446 EDEKDERGDGEEEGKEERRDMEKGGEERKEQQQEEQEKE 484
>09_02_0515 +
10121849-10122149,10132151-10132187,10132314-10132790,
10133184-10133733
Length = 454
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 89 VRHAEVFSVDHYVSELHVVSEEARHVN 9
++ + F+V++YV E +S RH N
Sbjct: 204 IKSGQAFAVENYVKEFATISLAIRHRN 230
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 104 GHLGDGHDEGRSHLPGLGHAGQ 169
G G GR LPG GH GQ
Sbjct: 126 GGAGGSSGGGRRSLPGHGHGGQ 147
>07_01_0907 - 7636725-7637681
Length = 318
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 104 GHLGDGHDEGRSHLPGLGHAGQEDL 178
GH G G G S PG G G DL
Sbjct: 282 GHRGGGDGAGGSAAPGGGGGGWSDL 306
>05_05_0071 -
22159793-22159809,22159893-22159953,22160041-22160210,
22160543-22160591
Length = 98
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 92 QQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 208
Q +G G G +G+SH P +D ++ + +E +
Sbjct: 5 QNSKGQNGGGFADGKSHSPTKARGAYKDGKQSYPNESSE 43
>03_02_0903 +
12285874-12285918,12286715-12286820,12286906-12286961,
12287062-12287113,12287182-12287282,12287891-12288287,
12288852-12288937,12289061-12289078
Length = 286
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 65 QKRPRHVEHQQDRGHLGDGHD 127
+K+ +HVEH GDG D
Sbjct: 64 KKKKKHVEHDTSLTEAGDGED 84
>01_05_0696 - 24366857-24368200
Length = 447
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 92 QQDRGHL-GDGHDEGRSHLPGLGHAGQE 172
QQ G L G+ EG LPG G GQE
Sbjct: 399 QQGSGGLPSGGYGEGNYPLPGPGFRGQE 426
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,218,393
Number of Sequences: 37544
Number of extensions: 91248
Number of successful extensions: 350
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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