Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12f15
(284 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 33 0.22
BC033078-1|AAH33078.1| 419|Homo sapiens UCKL1 protein protein. 31 0.68
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr... 30 1.2
BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein pr... 30 1.2
BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein. 30 1.2
BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein. 30 1.2
BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein. 30 1.2
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote... 30 1.2
AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens ... 28 4.8
BC107601-1|AAI07602.1| 463|Homo sapiens cyclin-dependent kinase... 28 6.3
BC105950-1|AAI05951.1| 463|Homo sapiens cyclin-dependent kinase... 28 6.3
BC069634-1|AAH69634.1| 463|Homo sapiens cyclin-dependent kinase... 28 6.3
AK223216-1|BAD96936.1| 757|Homo sapiens cartilage oligomeric ma... 27 8.3
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 35 QHEVR*RNDLQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHA 163
Q + R R + ++R RH EH R H G +E R+ GL A
Sbjct: 902 QQQQRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPA 944
>BC033078-1|AAH33078.1| 419|Homo sapiens UCKL1 protein protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 80 HVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRR 187
H H Q R HLG G R+ L GQ D RR
Sbjct: 330 HAHHHQVRAHLGTGRPRARAPAQLLAPQGQGDQSRR 365
>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
protein.
Length = 1004
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 856 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 895
>BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein
protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 462 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 501
>BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein.
Length = 957
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 809 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 848
>BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 299 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 338
>BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 333 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 372
>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein 1
variant protein.
Length = 1099
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 220
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 951 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 990
>AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ30881 fis, clone FEBRA2004818, highly similar to
DRR1 PROTEIN. ).
Length = 135
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 83 VEHQQDRGHLGDGHDEGRSHLPGL 154
+ QQ +GDGH G +H PGL
Sbjct: 101 LRRQQRLNQVGDGHPAGTTHPPGL 124
>BC107601-1|AAI07602.1| 463|Homo sapiens cyclin-dependent kinase 8
protein.
Length = 463
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 86 EHQQDRGHLGDGHDEGRSHLPGLGHAGQED 175
E D+G +G +H G GH G +D
Sbjct: 362 EEPDDKGDKNQQQQQGNNHTNGTGHPGNQD 391
>BC105950-1|AAI05951.1| 463|Homo sapiens cyclin-dependent kinase 8
protein.
Length = 463
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 86 EHQQDRGHLGDGHDEGRSHLPGLGHAGQED 175
E D+G +G +H G GH G +D
Sbjct: 362 EEPDDKGDKNQQQQQGNNHTNGTGHPGNQD 391
>BC069634-1|AAH69634.1| 463|Homo sapiens cyclin-dependent kinase 8
protein.
Length = 463
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 86 EHQQDRGHLGDGHDEGRSHLPGLGHAGQED 175
E D+G +G +H G GH G +D
Sbjct: 362 EEPDDKGDKNQQQQQGNNHTNGTGHPGNQD 391
>AK223216-1|BAD96936.1| 757|Homo sapiens cartilage oligomeric
matrix protein precursor variant protein.
Length = 757
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 98 DRGHLGDGHDEGRSHLPGLGHAGQED 175
D+ GDGH + R + P + ++ QED
Sbjct: 433 DQDQNGDGHQDSRGNCPTVPNSAQED 458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,704,496
Number of Sequences: 237096
Number of extensions: 451113
Number of successful extensions: 1282
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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