Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12f15
(284 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 27 0.045
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 0.73
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 0.73
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 0.73
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 0.73
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 0.73
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 0.73
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 0.73
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 0.73
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 0.73
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 0.73
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 0.73
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 0.73
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 0.73
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 0.73
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 0.73
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 1.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 1.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 1.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 3.9
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 3.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 6.8
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 27.1 bits (57), Expect = 0.045
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 80 HVEHQQDRGHLGDGHDEGR--SHLPGLGHAGQEDLQRRH 190
+ +HQQD G DG R S PG+GH G H
Sbjct: 93 YYQHQQDHGSGMDGMGGYRSASPSPGMGHMGHTPTPNGH 131
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S+ + DD++
Sbjct: 94 SNTSKTVILSDKLESSDDIS 113
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S + DD++
Sbjct: 94 SNTSKTVILSNKLESSDDIS 113
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKTV S + DD++
Sbjct: 94 SNTSKTVILSNKLESSDDIS 113
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 1.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 170 LDQHVRVQVGEIVLHHDH 117
L +H V +GEI HH++
Sbjct: 512 LQEHDSVMLGEISPHHEY 529
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 1.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SNTSKT+ S + DD++
Sbjct: 94 SNTSKTIILSNKLESSDDIS 113
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 3.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDDLT 143
SN SKTV S+ + DD++
Sbjct: 94 SNISKTVILSDKLESSDDIS 113
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 3.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 164 QHVRVQVGEIVLHHDH 117
+H V +GEI HH++
Sbjct: 212 EHDSVMLGEISPHHEY 227
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 84 SNTSKTVDTSEMVMMKDD 137
SNTSKT S+ + DD
Sbjct: 99 SNTSKTFILSDKLESSDD 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,174
Number of Sequences: 438
Number of extensions: 885
Number of successful extensions: 24
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5619645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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