Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12e24
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16Z88 Cluster: Putative uncharacterized protein; n=3; ...   112   8e-24
UniRef50_UPI0000E4897D Cluster: PREDICTED: similar to conserved ...    79   7e-14
UniRef50_Q9V3E0 Cluster: CG3706-PA; n=2; Sophophora|Rep: CG3706-...    66   5e-10
UniRef50_O45136 Cluster: Putative uncharacterized protein; n=2; ...    65   1e-09
UniRef50_A0Q0X0 Cluster: Phage anti-repressor, putative; n=23; r...    34   2.7  
UniRef50_UPI0000D55A7D Cluster: PREDICTED: similar to Calcineuri...    33   8.2  
UniRef50_P49050 Cluster: Nitrate reductase [NADPH]; n=4; Sacchar...    33   8.2  

>UniRef50_Q16Z88 Cluster: Putative uncharacterized protein; n=3;
           Endopterygota|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 324

 Score =  112 bits (269), Expect = 8e-24
 Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
 Frame = +3

Query: 219 KAIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXX--DTCLKQTE 392
           KA+DAVYFNG + E   ++CG ARR  N+ + F                   DTC+ Q++
Sbjct: 1   KAVDAVYFNGANSETTWLVCGTARRRNNLVNGFLYLKIADFSERLLVSPRLPDTCMWQSD 60

Query: 393 SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTWSAQWPHFNYDSH 572
            E G Y+  G+++   +PM+ WK+ Y G+M+ ++     + V+L   W+   P++N+ + 
Sbjct: 61  EELGRYEAEGLKLTPVVPMKKWKIEYQGAMRFENDLSQEMKVKLEAFWTTDLPYYNFATD 120

Query: 573 MAPYSMATDMARESWSQDYFKLLKK------LHQTHYE 668
           M P  +A  MA+E WS+++F+ LKK       HQTHYE
Sbjct: 121 MDPRPVARAMAKELWSREHFQNLKKYVSTVMYHQTHYE 158


>UniRef50_UPI0000E4897D Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 285

 Score = 79.4 bits (187), Expect = 7e-14
 Identities = 43/149 (28%), Positives = 75/149 (50%)
 Frame = +3

Query: 222 AIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXXDTCLKQTESEG 401
           A+DAVYFNG +++G  V+  +ARR   + +                    T L+  + + 
Sbjct: 12  AVDAVYFNGSNKDGVYVVTAIARRQNQMANVLTYLVLPGIGVLQLPDNPGTLLEDCDPD- 70

Query: 402 GEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTWSAQWPHFNYDSHMAP 581
            ++ V G+ + +  PM+ WK++Y+G M+                W+A   +F++D+ +  
Sbjct: 71  -KHSVGGLCIESVKPMKEWKISYHGKMR----------------WTALTTYFDFDTDLDA 113

Query: 582 YSMATDMARESWSQDYFKLLKKLHQTHYE 668
             MA  +ARE WS+ +F  LK+ HQTH+E
Sbjct: 114 SLMADTIAREKWSKQFFDELKRSHQTHHE 142


>UniRef50_Q9V3E0 Cluster: CG3706-PA; n=2; Sophophora|Rep: CG3706-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 444

 Score = 66.5 bits (155), Expect = 5e-10
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
 Frame = +3

Query: 207 SHPPKAIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXXDTCLKQ 386
           S+ PK+ D V F   ++EG  ++  + RR + +  A                  D     
Sbjct: 83  SNDPKSYDVVSFMAANKEGQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFT 142

Query: 387 TE--SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHF 557
           T   +E   ++  G  V+    MR W+L Y+G +K +      + V+L L + S+   HF
Sbjct: 143 TADGAESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHF 202

Query: 558 NYDSHMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYE 668
           +Y+  ++   +A  +ARE+W++ ++ LL+ ++     +THYE
Sbjct: 203 DYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYE 244


>UniRef50_O45136 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 426

 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
 Frame = +3

Query: 198 LEPSHPPK---AIDAVYFNGMSREGDAVICGVARRPQNICDA-FXXXXXXXXXXXXXXXX 365
           +E  H  K   + DAV+F+  +R+G  +  G A+RP NI +  F                
Sbjct: 87  MEKKHDMKQDWSADAVFFDASNRDGWYITLGTAQRPNNIINLFFILRIPEIGTFVNEELH 146

Query: 366 XDTCLKQTESEGGEYKV-NGIEVHNFIPMRTWKLTYNGSMKQ--------KSYPED---- 506
            DT +K  +    E+K  +G  V    PM+ W++ +NG +          K+  E+    
Sbjct: 147 TDTNVKSIQCPEKEWKTESGFIVSCIEPMKKWRIQFNGKLASAPGKINFIKNGSEEMKDG 206

Query: 507 --YLTVELSLTWSAQWPHFNYDSHMAPYSMATDMARESWSQDYFKLLKKLHQTHYE 668
                    LTW+     F++D   +P ++A  +A E WS+  F  ++  HQ+HYE
Sbjct: 207 IKIFDANFDLTWTNFGNQFDFDKMCSPTAIAHSLAIEPWSRGLFDKMRASHQSHYE 262


>UniRef50_A0Q0X0 Cluster: Phage anti-repressor, putative; n=23;
           root|Rep: Phage anti-repressor, putative - Clostridium
           novyi (strain NT)
          Length = 262

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = +3

Query: 390 ESEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPE--DYLTVELSLTWSAQWPHFNY 563
           E++ GE  V+G E+H F+ ++T    +   MK+  + E  D++ +    T +AQ     Y
Sbjct: 17  ENDNGEILVSGRELHEFLEVKTRYDIWFSRMKEYGFIENQDFIAIVQKRT-TAQGNETTY 75

Query: 564 DSHMAPYSMATDMA 605
             H     MA ++A
Sbjct: 76  TDHAIKLDMAKELA 89


>UniRef50_UPI0000D55A7D Cluster: PREDICTED: similar to
           Calcineurin-binding protein Cabin 1 (Calcineurin
           inhibitor) (CAIN); n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to Calcineurin-binding protein Cabin
           1 (Calcineurin inhibitor) (CAIN) - Tribolium castaneum
          Length = 2215

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 165 VYGVYII*NH--LLEPSHPPKAIDAVYFNGMSREGDAVICGVARRPQNICDA 314
           +Y +Y+   H  +L P H PK++    + G  RE D  I  +  +P++ CDA
Sbjct: 465 IYNMYVENQHVNILSPIHSPKSVSFEDYFGTDRETDD-ISNLWNQPRDYCDA 515


>UniRef50_P49050 Cluster: Nitrate reductase [NADPH]; n=4;
           Saccharomycetaceae|Rep: Nitrate reductase [NADPH] -
           Pichia angusta (Yeast) (Hansenula polymorpha)
          Length = 859

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 103 G*FQLLKLLVCVCD*INCLCWC 168
           G F+L   LV VCD ++CLCWC
Sbjct: 364 GYFRLFGGLVNVCDRMSCLCWC 385


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,120,733
Number of Sequences: 1657284
Number of extensions: 12105417
Number of successful extensions: 27186
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27176
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)