Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12e24
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119247-1|AAM51107.1|  444|Drosophila melanogaster SD20854p pro...    66   3e-11
AL109630-6|CAB51692.1|  444|Drosophila melanogaster EG:BACR7A4.2...    66   3e-11
AE014298-126|AAF45566.1|  444|Drosophila melanogaster CG3706-PA ...    66   3e-11

>AY119247-1|AAM51107.1|  444|Drosophila melanogaster SD20854p
           protein.
          Length = 444

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
 Frame = +3

Query: 207 SHPPKAIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXXDTCLKQ 386
           S+ PK+ D V F   ++EG  ++  + RR + +  A                  D     
Sbjct: 83  SNDPKSYDVVSFMAANKEGQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFT 142

Query: 387 TE--SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHF 557
           T   +E   ++  G  V+    MR W+L Y+G +K +      + V+L L + S+   HF
Sbjct: 143 TADGAESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHF 202

Query: 558 NYDSHMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYE 668
           +Y+  ++   +A  +ARE+W++ ++ LL+ ++     +THYE
Sbjct: 203 DYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYE 244


>AL109630-6|CAB51692.1|  444|Drosophila melanogaster EG:BACR7A4.20
           protein.
          Length = 444

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
 Frame = +3

Query: 207 SHPPKAIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXXDTCLKQ 386
           S+ PK+ D V F   ++EG  ++  + RR + +  A                  D     
Sbjct: 83  SNDPKSYDVVSFMAANKEGQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFT 142

Query: 387 TE--SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHF 557
           T   +E   ++  G  V+    MR W+L Y+G +K +      + V+L L + S+   HF
Sbjct: 143 TADGAESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHF 202

Query: 558 NYDSHMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYE 668
           +Y+  ++   +A  +ARE+W++ ++ LL+ ++     +THYE
Sbjct: 203 DYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYE 244


>AE014298-126|AAF45566.1|  444|Drosophila melanogaster CG3706-PA
           protein.
          Length = 444

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
 Frame = +3

Query: 207 SHPPKAIDAVYFNGMSREGDAVICGVARRPQNICDAFXXXXXXXXXXXXXXXXXDTCLKQ 386
           S+ PK+ D V F   ++EG  ++  + RR + +  A                  D     
Sbjct: 83  SNDPKSYDVVSFMAANKEGQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFT 142

Query: 387 TE--SEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYLTVELSLTW-SAQWPHF 557
           T   +E   ++  G  V+    MR W+L Y+G +K +      + V+L L + S+   HF
Sbjct: 143 TADGAESNAFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAEHF 202

Query: 558 NYDSHMAPYSMATDMARESWSQDYFKLLKKLH-----QTHYE 668
           +Y+  ++   +A  +ARE+W++ ++ LL+ ++     +THYE
Sbjct: 203 DYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYE 244


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,580,596
Number of Sequences: 53049
Number of extensions: 584921
Number of successful extensions: 1195
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)