Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12e24
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047651-6|AAC02725.3|  426|Caenorhabditis elegans Hypothetical ...    65   4e-11
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    31   0.98 
AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.     28   5.2  
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.     28   5.2  
Z46812-6|CAA86848.2|  546|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z37093-8|CAA85469.2|  546|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical...    27   9.1  

>AF047651-6|AAC02725.3|  426|Caenorhabditis elegans Hypothetical
           protein C05D2.8 protein.
          Length = 426

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
 Frame = +3

Query: 198 LEPSHPPK---AIDAVYFNGMSREGDAVICGVARRPQNICDA-FXXXXXXXXXXXXXXXX 365
           +E  H  K   + DAV+F+  +R+G  +  G A+RP NI +  F                
Sbjct: 87  MEKKHDMKQDWSADAVFFDASNRDGWYITLGTAQRPNNIINLFFILRIPEIGTFVNEELH 146

Query: 366 XDTCLKQTESEGGEYKV-NGIEVHNFIPMRTWKLTYNGSMKQ--------KSYPED---- 506
            DT +K  +    E+K  +G  V    PM+ W++ +NG +          K+  E+    
Sbjct: 147 TDTNVKSIQCPEKEWKTESGFIVSCIEPMKKWRIQFNGKLASAPGKINFIKNGSEEMKDG 206

Query: 507 --YLTVELSLTWSAQWPHFNYDSHMAPYSMATDMARESWSQDYFKLLKKLHQTHYE 668
                    LTW+     F++D   +P ++A  +A E WS+  F  ++  HQ+HYE
Sbjct: 207 IKIFDANFDLTWTNFGNQFDFDKMCSPTAIAHSLAIEPWSRGLFDKMRASHQSHYE 262


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 20/43 (46%), Positives = 22/43 (51%)
 Frame = +2

Query: 428  SSQFHTNANLETDLQWIYETKKLS*RLPNC*TISNMECTMASF 556
            S  F TN N E DL+   E KK   RLPN  T S  +C  A F
Sbjct: 2356 SLSFSTNGNDEEDLERPIERKKT--RLPNALTPSVADCIRAVF 2396


>AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical
           protein Y57A10B.1 protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 134 VYVIK*TVCVGVRSVHYLKPPTR-TITSTEGNRRGLFQRNVAR 259
           V+V   T C   R VH LK P+R T+T  E NR   F++  +R
Sbjct: 74  VFVSTTTRCHSGRKVHQLKNPSRVTVTQEEENRN--FEKKKSR 114


>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
           protein C34B4.1b protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +3

Query: 381 KQTESEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYL 512
           +Q  +E  +Y V+ + +H F+ ++  K+ Y+  +K +S  ++YL
Sbjct: 184 EQVRNENEKY-VDYVNLHEFVAIKDDKVVYSEIVKHRSTEKEYL 226


>Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical
           protein C34B4.1a protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +3

Query: 381 KQTESEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYL 512
           +Q  +E  +Y V+ + +H F+ ++  K+ Y+  +K +S  ++YL
Sbjct: 80  EQVRNENEKY-VDYVNLHEFVAIKDDKVVYSEIVKHRSTEKEYL 122


>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
          Length = 1045

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +3

Query: 381 KQTESEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYL 512
           +Q  +E  +Y V+ + +H F+ ++  K+ Y+  +K +S  ++YL
Sbjct: 130 EQVRNENEKY-VDYVNLHEFVAIKDDKVVYSEIVKHRSTEKEYL 172


>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +3

Query: 381 KQTESEGGEYKVNGIEVHNFIPMRTWKLTYNGSMKQKSYPEDYL 512
           +Q  +E  +Y V+ + +H F+ ++  K+ Y+  +K +S  ++YL
Sbjct: 184 EQVRNENEKY-VDYVNLHEFVAIKDDKVVYSEIVKHRSTEKEYL 226


>Z46812-6|CAA86848.2|  546|Caenorhabditis elegans Hypothetical
           protein ZK669.1b protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 219 KAIDAVYFNGMSREGDAVICGVARRPQNICDAF 317
           K+ID +   G+  +G    CGV  + + IC+AF
Sbjct: 198 KSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 230


>Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 219 KAIDAVYFNGMSREGDAVICGVARRPQNICDAF 317
           K+ID +   G+  +G    CGV  + + IC+AF
Sbjct: 427 KSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 459


>Z37093-8|CAA85469.2|  546|Caenorhabditis elegans Hypothetical
           protein ZK669.1b protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 219 KAIDAVYFNGMSREGDAVICGVARRPQNICDAF 317
           K+ID +   G+  +G    CGV  + + IC+AF
Sbjct: 198 KSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 230


>Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 219 KAIDAVYFNGMSREGDAVICGVARRPQNICDAF 317
           K+ID +   G+  +G    CGV  + + IC+AF
Sbjct: 427 KSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 459


>AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical
           protein Y9C9A.13 protein.
          Length = 688

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 317 KCITDILRSSSNSTNHSIAFSRHSVEINRVY 225
           KCI +ILRSS  + N  I   RH ++I   Y
Sbjct: 367 KCIGNILRSSKVTRNEQIYVVRHLLKILNRY 397


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,721
Number of Sequences: 27780
Number of extensions: 311923
Number of successful extensions: 683
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)