Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12e11
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 90 1e-18
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 80 1e-15
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 37 0.010
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 36 0.031
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 31 0.89
AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine re... 31 0.89
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 30 1.2
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 30 1.2
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine re... 30 1.6
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66513-7|CAA91336.2| 289|Caenorhabditis elegans Hypothetical pr... 29 2.7
Y08815-1|CAA70049.1| 289|Caenorhabditis elegans TFIIE-beta prot... 29 2.7
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 2.7
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila... 29 3.6
Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical p... 28 4.8
Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical p... 28 4.8
Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical pr... 28 4.8
U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2 ... 28 4.8
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 28 4.8
Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z73971-2|CAA98252.1| 273|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 8.3
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 27 8.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 8.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 8.3
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 90.2 bits (214), Expect = 1e-18
Identities = 46/163 (28%), Positives = 88/163 (53%)
Frame = +2
Query: 128 TVKEDEYNPYEHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIA 307
TV ED + E + ++ +++K+ LG+GLL++PLAF +SG +G+I T++I
Sbjct: 31 TVSEDTSLFQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLIC 90
Query: 308 FVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFF 487
+C +C+ V + C R L+ Y+ + A E GP ++ + + +F
Sbjct: 91 LICLYCMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFI 150
Query: 488 TYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPL 616
+ +G CC++ V +AD+L+ F+ T+ L + L++L+P+
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNN-TSIHLSKAVWMLLLLIPM 192
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/141 (27%), Positives = 74/141 (52%)
Frame = +2
Query: 194 RSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVR 373
++L ++IK +G+G+L++PLAF +SG +G+I I +C +C + + R
Sbjct: 43 QALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKR 102
Query: 374 RPLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFD 553
+ Y+ ++A E GP +R + + +F G CC++ V +AD+LKQ FD
Sbjct: 103 EQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMADNLKQFFD 162
Query: 554 EYVTTTVLPVEYYCLIILVPL 616
+ + + + L +L+P+
Sbjct: 163 QTSSIHISQAGWIAL-LLIPI 182
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 68.9 bits (161), Expect = 3e-12
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 158 EHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIF 337
EH K K S +L NL+K LG+G ++PLAF SG+ G++ +V+ F+C C+
Sbjct: 15 EHYK--KAISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKL 72
Query: 338 VKTSRGCCKLVRRPLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFT 517
VK + K+ + L Y A + +R A ++ +L +G+CC F
Sbjct: 73 VKCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFY 132
Query: 518 VLIADSLKQLFDEYVT-----TTVLPVEYYCLIILVPLCLM 625
+ + L +L + + T+ P+ I+LV L M
Sbjct: 133 IFVVYHLHELLEFVMNDVPSRATLFPMVLPAFILLVSLSSM 173
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 68.1 bits (159), Expect = 5e-12
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Frame = +2
Query: 197 SLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRR 376
+L NL+K LG+G ++PLAF SG+ G++ +V+ F+C C+ VK + K+ +
Sbjct: 81 ALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQS 140
Query: 377 PLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDE 556
L Y A + +R A ++ +L +G+CC F + + L +L +
Sbjct: 141 APLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELLEF 200
Query: 557 YVT-----TTVLPVEYYCLIILVPLCLM 625
+ T+ P+ I+LV L M
Sbjct: 201 VMNDVPSRATLFPMVLPAFILLVSLSSM 228
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 194 RSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVR 373
R++ L KS +G ++P A+ G V + + VIA + + HI V+ S+ K
Sbjct: 41 RAVLTLSKSMFNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKSD 100
Query: 374 RPLLSYSETCKAAFEHGP-KSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLF 550
R L Y K ++ + LR + A F + F +G+C + + I+D+L L
Sbjct: 101 RSALDYGHFAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLV 160
Query: 551 DEYVTTT 571
+++ T
Sbjct: 161 GDHLGGT 167
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +2
Query: 152 PYEHRK-IEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCV 328
P+E K + I ++ ++ + +G+ LLAMP A +G +GII + +A +C +
Sbjct: 120 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 179
Query: 329 HIFVKTSRGCCKLVRRPLLS-YSETCKAAF 415
+I +++ + L PLL+ +S+ CK+ F
Sbjct: 180 YIVIESPKRLQDLSVDPLLAEFSDVCKSLF 209
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +2
Query: 152 PYEHRK-IEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCV 328
P+E K + I ++ ++ + +G+ LLAMP A +G +GII + +A +C +
Sbjct: 154 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 213
Query: 329 HIFVKTSRGCCKLVRRPLLS-YSETCKAAF 415
+I +++ + L PLL+ +S+ CK+ F
Sbjct: 214 YIVIESPKRLQDLSVDPLLAEFSDVCKSLF 243
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +2
Query: 152 PYEHRK-IEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCV 328
P+E K + I ++ ++ + +G+ LLAMP A +G +GII + +A +C +
Sbjct: 152 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 211
Query: 329 HIFVKTSRGCCKLVRRPLLS-YSETCKAAF 415
+I +++ + L PLL+ +S+ CK+ F
Sbjct: 212 YIVIESPKRLQDLSVDPLLAEFSDVCKSLF 241
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/137 (21%), Positives = 61/137 (44%)
Frame = +2
Query: 200 LANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRP 379
L N I +G G ++ ++F +G G+ ++ F+ + +H V S+ K
Sbjct: 69 LINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQ 128
Query: 380 LLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEY 559
L Y E +AA ++ K R A++ L +GV +F V + + ++++ +
Sbjct: 129 SLDYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVEHVIEIWEFF 188
Query: 560 VTTTVLPVEYYCLIILV 610
+ P C++IL+
Sbjct: 189 ADSP--PPFSKCVMILM 203
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +2
Query: 227 GSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLS-YSETC 403
GSGL+A+P A + G+ +G GTI + +C + + T G ++ + S YSE C
Sbjct: 20 GSGLVALPSAMQSLGF-MG--GTITLIVMC--LITYYTATLLGNNWIIMKTRWSEYSEHC 74
Query: 404 KAAF-EHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEY 559
+ + E K+L + + + F +FT G +F++L A +L ++ + +
Sbjct: 75 RNPYPEMAHKALGTW---MGMTTNFCTYFTVFGGTAVFSLLAAKTLAEVLNGF 124
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 35.5 bits (78), Expect = 0.031
Identities = 24/136 (17%), Positives = 57/136 (41%)
Frame = +2
Query: 200 LANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRP 379
L N + +G G ++ ++F +G G +I + + +H V S+ +
Sbjct: 41 LINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQFLSEKKGDQ 100
Query: 380 LLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEY 559
L Y E K+A E+ + + A++ L +GV + + + + +++ ++
Sbjct: 101 KLDYGEMAKSAMENSYGWAKKYGKIAKVVVNTCLLAFQLGVITVSMIFAVEHIIEIW-QF 159
Query: 560 VTTTVLPVEYYCLIIL 607
+ + P LI++
Sbjct: 160 IAGSPPPFSKIVLILM 175
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 209 LIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIA 307
+I +G G++AMP+AF SG +GI+ + +A
Sbjct: 53 IIADMVGGGVVAMPVAFKLSGLPMGILIMLTVA 85
>Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical
protein T10H4.2 protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 104 KLEKMSGKTVKEDEYN---P---YEHRKIEKPNSDIRSLANLIKSSLGSGLLAM 247
KLE ++ DEY+ P YEHRKI N +IR + S LG G++A+
Sbjct: 168 KLEFEEAYCLEPDEYSYVGPQYFYEHRKIIDSNEEIREKIFHLPSFLGIGIIAV 221
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 30.7 bits (66), Expect = 0.89
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Frame = +2
Query: 173 EKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSR 352
EK S + + ++ + G GL+A+P A ++G G +V A VC + + +
Sbjct: 8 EKGMSILVTALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAEN-- 65
Query: 353 GCCKLVRRPLLSYSETCKAAF-EHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIA 529
+++ Y + C+ + G +++ P FA F L T G +F +L A
Sbjct: 66 --WTILQELYPEYRDHCRKPYPAMGLRAIGP-KFAH--FVSAMLQVTQFGTAVVFVLLAA 120
Query: 530 DSLKQLFDEYVTTTVLPVEYYCLIILV 610
+ + + T V +C +IL+
Sbjct: 121 KNGENMLHANFGTHV----SFCYMILI 143
>AF016664-1|AAB66070.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein77 protein.
Length = 324
Score = 30.7 bits (66), Expect = 0.89
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 181 WLLDFTMFIRIVFVFLNSLPTHFF*FRIHLFNRDNLY*FCYENLMFQMAWNSTESD 14
WLL++ I +V LNS+ +F +FN + L F Y L+FQ++ T+ D
Sbjct: 11 WLLNYFHLIGLVSFILNSIGIYFL-----IFNTNRLGNFKYYLLLFQLSCVLTDID 61
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 KEDEYNPYEHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIV-IAF 310
K++E H + +P S +++ N+ + G ++ +P+A GW IG +V +A+
Sbjct: 73 KQEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGW--WSIGAMVGVAY 130
Query: 311 VC 316
VC
Sbjct: 131 VC 132
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 KEDEYNPYEHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIV-IAF 310
K++E H + +P S +++ N+ + G ++ +P+A GW IG +V +A+
Sbjct: 73 KQEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGW--WSIGAMVGVAY 130
Query: 311 VC 316
VC
Sbjct: 131 VC 132
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 224 LGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKT-SRGCCKLVRRPLLSYSET 400
+G+G LA+P AF +GW + I AF+ ++ S L ++ + Y +
Sbjct: 27 VGTGALALPKAFQTAGWLLSITLLTFSAFMSYVAATFVIEALSVANAVLSKKRRVEYDDV 86
Query: 401 CKA----AFEHGPKSLRPFAFAAQLFSEFALFFTYIGV 502
A FE K + A+ S+ +L F+Y +
Sbjct: 87 VVADGPSTFEIS-KKVEVSEMASMFLSKVSLVFSYFAI 123
>AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein74 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 181 WLLDFTMFIRIVFVFLNSLPTHFF*FRIHLFNRDNLY*FCYENLMFQMAWNSTESD 14
WLL++ FI +V LNS+ +F +F + L F Y L+FQ++ T+ D
Sbjct: 11 WLLNYFHFIGLVSFILNSIGIYFL-----MFMSNQLGKFKYYLLLFQLSCVLTDID 61
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.1
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Frame = +2
Query: 140 DEYNPYEHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCG 319
D+ P H EK I +I + G G++A+ A ++ G G+I +
Sbjct: 11 DKDGPTSHTN-EKGIGWIIGAIFIIGETAGGGMIALSYALTSMGLIPGLI-------LLS 62
Query: 320 HCVHIFVKTSRGCC---KLVRRPLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFT 490
C + T+ C K+++ Y + C+ + G + R + F F + T
Sbjct: 63 LCSIFSLYTALELCWTWKIMQNRWPEYRDHCRKPY--GEMAYRTIGRKMRSFIAFMICIT 120
Query: 491 YIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPLCL 622
IG + +L A +L L + + L + LI++V L +
Sbjct: 121 QIGFATVLVLLAAKNLSILLHFFFS---LDINQCYLILIVGLAV 161
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -1
Query: 261 EKASGIASRPEPNEDLIR-----FANDLISEFGFSILRCSYGLYSSSLTVFPLIFSSLGY 97
+ +S A +P +E IR + + ++S+F F + ++ + SL + L+ S+ G
Sbjct: 829 DASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLYWSLLSSARGI 888
Query: 96 ICSIEITYIDFV 61
+ ++ IDF+
Sbjct: 889 NSKLTLSVIDFI 900
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -1
Query: 261 EKASGIASRPEPNEDLIR-----FANDLISEFGFSILRCSYGLYSSSLTVFPLIFSSLGY 97
+ +S A +P +E IR + + ++S+F F + ++ + SL + L+ S+ G
Sbjct: 829 DASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLYWSLLSSARGI 888
Query: 96 ICSIEITYIDFV 61
+ ++ IDF+
Sbjct: 889 NSKLTLSVIDFI 900
>Z66513-7|CAA91336.2| 289|Caenorhabditis elegans Hypothetical
protein F54D5.11 protein.
Length = 289
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 540 FKESAIRTVKIQQTPM*VKNKANSENNCAAKAKGRNDFGPCSN 412
F++ A T+ +Q P N + ++ AAKAK + GP N
Sbjct: 12 FQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQN 54
>Y08815-1|CAA70049.1| 289|Caenorhabditis elegans TFIIE-beta protein
protein.
Length = 289
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 540 FKESAIRTVKIQQTPM*VKNKANSENNCAAKAKGRNDFGPCSN 412
F++ A T+ +Q P N + ++ AAKAK + GP N
Sbjct: 12 FQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQN 54
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -1
Query: 261 EKASGIASRPEPNEDLIR-----FANDLISEFGFSILRCSYGLYSSSLTVFPLIFSSLGY 97
+ +S A +P +E IR + + ++S+F F + ++ + SL + L+ S+ G
Sbjct: 829 DASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLYWSLLSSARGI 888
Query: 96 ICSIEITYIDFV 61
+ ++ IDF+
Sbjct: 889 NSKLTLSVIDFI 900
>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
roughdeal) homologprotein 1 protein.
Length = 2049
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 343 NIKRMLQARATTSSKLLGDLQSCIRAWTKVVTTFRFCCTII 465
N +M+ A T++ L G + C++ ++ R CC+II
Sbjct: 753 NYIQMMSGAAVTNANLFGWEKQCVQLCASLMDETRRCCSII 793
>Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical
protein M110.5d protein.
Length = 492
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 77 VISIEQMYPKLEKMS----GKTVKEDEYNPYEHRKIEKPNSDIRSLA 205
V S+E+ + KL M G+ +KE + NP+EH + P + + S++
Sbjct: 418 VTSLEEAFTKLVDMDALVGGQGIKETKKNPFEH-ILNPPKASLNSMS 463
>Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical
protein M110.5a protein.
Length = 490
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 77 VISIEQMYPKLEKMS----GKTVKEDEYNPYEHRKIEKPNSDIRSLA 205
V S+E+ + KL M G+ +KE + NP+EH + P + + S++
Sbjct: 416 VTSLEEAFTKLVDMDALVGGQGIKETKKNPFEH-ILNPPKASLNSMS 461
>Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical
protein M110.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 77 VISIEQMYPKLEKMS----GKTVKEDEYNPYEHRKIEKPNSDIRSLA 205
V S+E+ + KL M G+ +KE + NP+EH + P + + S++
Sbjct: 418 VTSLEEAFTKLVDMDALVGGQGIKETKKNPFEH-ILNPPKASLNSMS 463
>Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical
protein M110.5c protein.
Length = 474
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 77 VISIEQMYPKLEKMS----GKTVKEDEYNPYEHRKIEKPNSDIRSLA 205
V S+E+ + KL M G+ +KE + NP+EH + P + + S++
Sbjct: 400 VTSLEEAFTKLVDMDALVGGQGIKETKKNPFEH-ILNPPKASLNSMS 445
>U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2
protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Frame = -3
Query: 376 SSHELATSS*CFHEYMHTVSTN-------KCNDDCSNNAD-CPARIGESQWHSK 239
++H L S C EY+HT+ N C+ CSN+ + C + +W +K
Sbjct: 222 NAHNLTLSHECLQEYVHTLPCNCTMAGITPCHTSCSNSMEKCFGKFSR-EWAAK 274
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = -1
Query: 387 LRRGRRTSLQHPLDVFTNICTQCP----QTNAMTIVPIMPT--AQPELEKASGIASRPEP 226
LRRGRR P+ T++ + P +T + + VP PT A P+ ++ +++ EP
Sbjct: 500 LRRGRRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPTGLAAPKTPLSASVSATNEP 559
Query: 225 N 223
+
Sbjct: 560 D 560
>Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical
protein Y26G10.1 protein.
Length = 677
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 177 FSILRCSYGLYSSSLTVFPLIFSSLGYICSIEITYID-FVTK 55
FS+ G Y S L VF + + L +C ++ ++D FV+K
Sbjct: 129 FSLYGSFTGDYFSQLMVFVMAVNRLAVVCGVKAKFLDIFVSK 170
>Z73971-2|CAA98252.1| 273|Caenorhabditis elegans Hypothetical
protein C50H2.4 protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +2
Query: 86 IEQMYPKLEK-MSGKTVKEDEYNPY 157
++Q+Y ++E+ +GK VKE EY P+
Sbjct: 99 LQQLYVRIEEDKNGKNVKEQEYCPF 123
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 378 GRRTSLQHPLDVFTN-ICTQCPQTNAMTIVPIMPTAQPELEKASGIASRPEPNEDLIRFA 202
GR S+ F N +CT C Q + ++ M T + L + + +P P + + R
Sbjct: 1674 GRTCSMCQERHAFINRVCTSCDQGCYLPLMETMDTMEEHLGRQNFSGLKPIPWKRVWRIG 1733
Query: 201 ND 196
N+
Sbjct: 1734 NE 1735
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +2
Query: 209 LIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGH 322
++ +G+G++++PLA SG G + ++ + G+
Sbjct: 48 IVGDMMGAGMISLPLALGRSGLIAGCVLILLASIFSGY 85
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 378 GRRTSLQHPLDVFTN-ICTQCPQTNAMTIVPIMPTAQPELEKASGIASRPEPNEDLIRFA 202
GR S+ F N +CT C Q + ++ M T + L + + +P P + + R
Sbjct: 1674 GRTCSMCQERHAFINRVCTSCDQGCYLPLMETMDTMEEHLGRQNFSGLKPIPWKRVWRIG 1733
Query: 201 ND 196
N+
Sbjct: 1734 NE 1735
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 378 GRRTSLQHPLDVFTN-ICTQCPQTNAMTIVPIMPTAQPELEKASGIASRPEPNEDLIRFA 202
GR S+ F N +CT C Q + ++ M T + L + + +P P + + R
Sbjct: 1674 GRTCSMCQERHAFINRVCTSCDQGCYLPLMETMDTMEEHLGRQNFSGLKPIPWKRVWRIG 1733
Query: 201 ND 196
N+
Sbjct: 1734 NE 1735
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,819
Number of Sequences: 27780
Number of extensions: 311584
Number of successful extensions: 1067
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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